Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02790 ATGGAGCACAATTTGTCAGAAGAGGCACACCCTAGTGCTCACCCTAGTGCTCATAGTAGTTGTGCAAATTCAGGAAACAATTCACCAACTCATCCCAAGAATGGGAACCAAGAAGCAAAAGACACCAGCACAACAACAACTGTCCACAATTCAGGAAGTGAAACTGAACAGGAGGACCAGGTTTTCAAAACTGATGCAAAGGTGGAAGGTAAATCCAGACCCCAGAAGTTAATGCCACCAAACAGGAACATATCTGATTTCAACCCTCAACACCAACAAAGTCCAAGTGCAAAGAAGCCTAACAATTCAAATTCTGAACATCATGCAAAGGCAATGTCTGTGTCTACCCCTCATACAAAGACCAGTACCAATCAAGGTAAAGGGAGTGGTGCTAGTTCTCGCAGTGACAGCTTAGAGAGCACAAGTGCACCAATTAGGCCACACACTGGAGGTGATGTGAGGTGGGAAGCTATTAACATGGTTTCAAGGGGTGGCCCTCTCAATCTCAGCCATTTCAGGCTTCTCAAGCGCATTGGTTATGGCGACATTGGAAGTGTGTACCTAGTGGAACTCAAGGGAACTAGGACCTACTTTGCTATGAAAGTAATGGACAAGGCAGCTCTTATAAGCAGAAATAAGCTACTGAGGGCACAAACAGAAAGGGAGATTCTTGGACTCCTTGATCACCCCTTCCTCCCCACTTTGTATAATTACTTTGAAACTGATAAGTTTTATTGTTTGGTCATGGAATTCTGTAGTGGGGGTGATCTTCATTCTCTTAGACAGAAGCAACCTAACAAGTGTTTCACTGAAGAAGCTGCAAGATTTTATGCTTCAGAGGTTTTGTTAGCTCTGGAGTACCTGCACATGCTTGGCATTGTATATAGAGACTTAAAGCCAGAGAACCTTCTAGTCAGAGATGAAGGGCACATCATGCTCTCAGATTTTGATTTATCCCTTCGCTGCTCTGTCAATCCTACACTAGTAAAGTCTTCATCCGCCCACGCAAGCAACAGTAGTGGTGGTAGTGGTAACAATGACTCTGGCGGTATATTAACTGATGACCAAGCAGTGCAAAACACTGCTCAGGCATCAAGTTTTTTCCCGCGCATTTTGCCTTCCAAGAAGAACCGCAAGGCAAAGTCAGATTTCGGCCTATTGGTCGGTGGAGCACGCCTTCCTGAACTGATGGCAGAACCCACCAATGTGCGTTCGATGTCATTTGTAGGGACACATGAGTACCTTGCTCCTGAGATTATCAAAGGAGAGGGTCATGGTAGTGCAGTAGACTGGTGGACTTTTGGTATCTTCTTGTATGAGTTGTTGCATGGAACAACCCCTTTCAAGGGTGCAGGATATAAAGCCACACTTTTCAATGTTGTTGGACAACCACTTAAGTTCCCAGAAACTACCCAAGTTAGTTCTGTGGCTCGTGACCTTATTAGGGGATTGTTGGTGAAAGAGCCTCAGAAGAGAATTGCATACAAGAGAGGAGCTACAGAGATAAAACAACACCCATTTTTTGAGGGAATGAACTGGGCTCTAGTTAGAAGTGCCACACCTCCCCACATACCAGATGCTATAGACTTCTCCAAGTATGCTAGCAAAGACAAAGCACCCCCACCAGACAAGAAGATGGCAGATATTGCTAATGATAAACACAGCAACAATGCTACTGATTCTTACATAGATTTTGAGTATTTTTAG 1707 0.4435 MEHNLSEEAHPSAHPSAHSSCANSGNNSPTHPKNGNQEAKDTSTTTTVHNSGSETEQEDQVFKTDAKVEGKSRPQKLMPPNRNISDFNPQHQQSPSAKKPNNSNSEHHAKAMSVSTPHTKTSTNQGKGSGASSRSDSLESTSAPIRPHTGGDVRWEAINMVSRGGPLNLSHFRLLKRIGYGDIGSVYLVELKGTRTYFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYNYFETDKFYCLVMEFCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVNPTLVKSSSAHASNSSGGSGNNDSGGILTDDQAVQNTAQASSFFPRILPSKKNRKAKSDFGLLVGGARLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGYKATLFNVVGQPLKFPETTQVSSVARDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGMNWALVRSATPPHIPDAIDFSKYASKDKAPPPDKKMADIANDKHSNNATDSYIDFEYF 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02790 568 MobiDBLite consensus disorder prediction 531 559 - -
Pumo4g02790 568 CDD STKc_phototropin_like 170 529 - -
Pumo4g02790 568 SUPERFAMILY Protein kinase-like (PK-like) 161 526 IPR011009 -
Pumo4g02790 568 MobiDBLite consensus disorder prediction 332 353 - -
Pumo4g02790 568 FunFam serine/threonine-protein kinase D6PK-like 256 323 - -
Pumo4g02790 568 MobiDBLite consensus disorder prediction 531 551 - -
Pumo4g02790 568 Gene3D Transferase(Phosphotransferase) domain 1 402 526 - -
Pumo4g02790 568 ProSiteProfiles Protein kinase domain profile. 172 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02790 568 FunFam Serine/threonine-protein kinase AGC1-7 401 526 - -
Pumo4g02790 568 FunFam Serine/threonine-protein kinase D6PK-like 170 255 - -
Pumo4g02790 568 SMART serkin_6 172 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02790 568 MobiDBLite consensus disorder prediction 16 55 - -
Pumo4g02790 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Pumo4g02790 568 Gene3D Phosphorylase Kinase; domain 1 170 255 - -
Pumo4g02790 568 MobiDBLite consensus disorder prediction 78 144 - -
Pumo4g02790 568 MobiDBLite consensus disorder prediction 1 150 - -
Pumo4g02790 568 Pfam Protein kinase domain 399 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02790 568 Pfam Protein kinase domain 173 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02790 568 PANTHER FLIPPASE KINASE 1-RELATED 28 534 - -
Pumo4g02790 568 Gene3D Transferase(Phosphotransferase) domain 1 256 327 - -
Pumo4g02790 568 MobiDBLite consensus disorder prediction 56 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02790 Pumo-Chr4 51495679 51498536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02790 138 568 AGC Kinase Gene Family AT1G79250 72.687 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pumo4g02790 Pkinase 4.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02790 - - gmx:100819001 977.237