Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02725 ATGGCAAAGGAGGCCATACCAATAAGGGTAGTTCTTGATTTCAACTCCTCAATTGGAAGTATGTCTAATAGCTGCATATGGATGGCATACCAGGATTTCTATGAACGCCACCCTCAATACAAAACCAGACTTACTCTTCAAACCCGAGATTCTGGGGAAAATGTTGTCACAGCAGCATCTGTAGCACAAGAATTGTTAAATGAGAAGGTGCATGCAATCATTGGACCACAAACCTCAGAACAAGCTTGGTTCGTTACAGAGCTTGGAAGCAAAGCTCAAGTACCCGTAATCTCGTTTTCTGCCACAAGTCCATCACTTTCCCCGACCCGAAAACCTTATTTCATTCGCACAGCACGGGATGATTCCTCTCAGGAAATTCTCACAGAGCATCGCATGTTGAAGGCTCAAAATGAAGCAAATGAAAAGAGGATTTCTGCACTAGAGTCTAAATTGAAAGCCCTTGAAGATAAAGTTAATGGCTAA 483 0.4265 MAKEAIPIRVVLDFNSSIGSMSNSCIWMAYQDFYERHPQYKTRLTLQTRDSGENVVTAASVAQELLNEKVHAIIGPQTSEQAWFVTELGSKAQVPVISFSATSPSLSPTRKPYFIRTARDDSSQEILTEHRMLKAQNEANEKRISALESKLKALEDKVNG 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02725 160 SUPERFAMILY Periplasmic binding protein-like I 16 124 IPR028082 -
Pumo4g02725 160 PANTHER OS06G0188250 PROTEIN 3 124 - -
Pumo4g02725 160 Coils Coil 130 160 - -
Pumo4g02725 160 Gene3D - 1 159 - -
Pumo4g02725 160 Pfam Receptor family ligand binding region 28 124 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02725 Pumo-Chr4 49374696 49380159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02725 6 124 Ion Channels AT2G29100 50.833 1.69e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02725 K05387 - gmx:100800495 220.32