Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02717 ATGAAATCTCGTCTTGAAGAATTAGGAAAGCTCTTATGTCTGGGGTCAGTTAATGATGTTCGAGTTGTCGGAATTAGTGGGATGGGTGGAATAGGAAAGTCAACTCTTGGTCATGCTTTATATGAAAGAATCTCTCATCAATATGATTTTCGGTGTTATATTGATGATGTGAGCAAAATTTATCGAGATTCTAGTACATTAGGTGTACAAAAGCAGTTACTTTCTCAGTCTCTAAATGAAAAAAATCTAGAGATTTGTAATGTATATGAAGGAACTTGTTTGGCATGGACTAGGCTACGCCATGTAAGGGCACTTATAGTTCTTGATAATGTTGATCAAGATGAACAACTAAAGATGCTTACAGGGAGTAGAGATACTCTGTTACGTGAATGCCTAGGTAGAGGGAGCAAAATCATTATAATTTCTAGGGATCAATAA 438 0.3607 MKSRLEELGKLLCLGSVNDVRVVGISGMGGIGKSTLGHALYERISHQYDFRCYIDDVSKIYRDSSTLGVQKQLLSQSLNEKNLEICNVYEGTCLAWTRLRHVRALIVLDNVDQDEQLKMLTGSRDTLLRECLGRGSKIIIISRDQ 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02717 145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 144 IPR027417 -
Pumo4g02717 145 Gene3D - 1 145 IPR027417 -
Pumo4g02717 145 Pfam NB-ARC domain 18 120 IPR002182 GO:0043531
Pumo4g02717 145 PRINTS Disease resistance protein signature 22 37 - -
Pumo4g02717 145 PRINTS Disease resistance protein signature 98 112 - -
Pumo4g02717 145 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 145 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02717 Pumo-Chr4 49023059 49023496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02717 3 145 WRKY Transcription Factor Family AT5G45050 34.266 4.70e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02717 - - vra:106780741 215.312