Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02715 ATGTTTCATCGCTTTGGCTTGGCAATAAAATTTTCAGGAAGACTTGATAATCTTTCTAATGAATTAGGATATCTTGATTGGACTAACTATCCTTTTGAGTGTTTGCCACCAAGTTTTGAGCCAGACAAACTTATTGAGTTGATCCTGTGCCACAACAACATCAAACGACTTTGGGAAGGAACAAAGATGCTAGATATTGGAGAGTCCATAAATCTTGAGGAGCTTAATCTCGAAGGATGTTTACGACTCAAGCAGATCTGTCCATCAATTGGTCTTCTAAAAAAGCTTGATTATATGAATTTGAAAGATTGCAAAAGTTTTATCAAGCTACCACATTTTGGTGAGGCCCTAAATCTTAAAAAGCTAAATCTCAAAGAATGCATTCAACTCAGGCAGATCGATCCATCCATTGGTCTTCTAAGAAAGCTTACATTTTTTAATTTGGAAAACTGCAAAAATCTAGAAAGCTTACCCAATAGCATATTAGGCCTCAATTCTCTTGAATATCTGAATCTCTCCAGCTGTTTAAAATTGTATAATATTCACTTATTAGATGAATTAAGGGATGCAGATCATTCGAAGTAG 585 0.3504 MFHRFGLAIKFSGRLDNLSNELGYLDWTNYPFECLPPSFEPDKLIELILCHNNIKRLWEGTKMLDIGESINLEELNLEGCLRLKQICPSIGLLKKLDYMNLKDCKSFIKLPHFGEALNLKKLNLKECIQLRQIDPSIGLLRKLTFFNLENCKNLESLPNSILGLNSLEYLNLSSCLKLYNIHLLDELRDADHSK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02715 194 SUPERFAMILY L domain-like 18 182 - -
Pumo4g02715 194 Gene3D Ribonuclease Inhibitor 10 189 IPR032675 -
Pumo4g02715 194 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 180 IPR044974 GO:0006952
Pumo4g02715 194 Pfam Leucine Rich Repeat 43 62 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02715 Pumo-Chr4 49021485 49022287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02715 8 180 WRKY Transcription Factor Family AT4G12020 35.260 1.35e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02715 - - gmx:100812758 232.261