Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02706 ATGCTACTAGGTAAACGCAAGGGTTTAAGAGAGGCAAGGCTTCCCACTAAAATCCTTTGGATGAGGAGAATGCATGTGCTCAGATGCTTGCTTCACAAGTACATGGAATCTAAGAAGATTGACAAGCACATGTACCATGACAAGTACATGAAGGTTAAGGGTAATGTTTTCAAGAACAAGAGGGTTTTAATGGAGAGCACACACAAGTCCAAAGCTGAGAAGGCAAGAGAGAAGACCTTGTCTGATCAGTTTGAGGCCAAACGTGCCAAGAACAAGGCCAACAGAGAAAGGAAAATTGCTCAGAGGGAGGAGCGATTGGCCCAAGGTCCTGGAGAAAAGGTATCAACCGCACCCAGTGCTCCAGCTGCTACAGTATCACAACCAGTCTAG 390 0.459 MLLGKRKGLREARLPTKILWMRRMHVLRCLLHKYMESKKIDKHMYHDKYMKVKGNVFKNKRVLMESTHKSKAEKAREKTLSDQFEAKRAKNKANRERKIAQREERLAQGPGEKVSTAPSAPAATVSQPV 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02706 129 Pfam Ribosomal protein L19e 4 70 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pumo4g02706 129 MobiDBLite consensus disorder prediction 67 109 - -
Pumo4g02706 129 MobiDBLite consensus disorder prediction 67 129 - -
Pumo4g02706 129 SUPERFAMILY Ribosomal protein L19 (L19e) 3 68 IPR035970 GO:0003735|GO:0005840|GO:0006412
Pumo4g02706 129 Coils Coil 86 106 - -
Pumo4g02706 129 Gene3D - 1 117 - -
Pumo4g02706 129 FunFam Ribosomal protein L19 1 120 - -
Pumo4g02706 129 PANTHER 60S RIBOSOMAL PROTEIN L19 3 113 IPR039547 GO:0003723|GO:0003735|GO:0022625
Pumo4g02706 129 SMART Ribosomal_L19e_2 1 71 IPR000196 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02706 Pumo-Chr4 48633190 48633741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02706 4 128 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 78.400 7.94e-64 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02706 K02885 - gmx:100527501 193.741