Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02705 ATGAGGAGAATGTGTGTGCTCAGATGCTTGATTCACATGGATAGGGAATCTAACAAGATTGACAAGAACATCTACCATGACATGTACATGAAGGTTAAGGGTAATGTTTTCAAGAACAAAAGGGTTTTAATGGAGAGCACACACAAGTCCAAAGCTGAGAAGGCAAGAGAGAAGACCTTGTCTGATCAGTTTGAGGCCAAATGTGCCAAGACAAGGCCAACAGAGAAAGGAAAATTGCTTAGAGGGAGGAGTGATTGGCCCAAGGTCCTGGAGAAAAGGTATCAACCGCACCCTAGTGCTCCAACTGCTACAGTGTCACAACCAGTCTAA 330 0.4424 MRRMCVLRCLIHMDRESNKIDKNIYHDMYMKVKGNVFKNKRVLMESTHKSKAEKAREKTLSDQFEAKCAKTRPTEKGKLLRGRSDWPKVLEKRYQPHPSAPTATVSQPV 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02705 109 MobiDBLite consensus disorder prediction 71 92 - -
Pumo4g02705 109 SUPERFAMILY Ribosomal protein L19 (L19e) 1 48 IPR035970 GO:0003735|GO:0005840|GO:0006412
Pumo4g02705 109 Pfam Ribosomal protein L19e 1 50 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pumo4g02705 109 SMART Ribosomal_L19e_2 1 51 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pumo4g02705 109 Gene3D - 1 86 - -
Pumo4g02705 109 PANTHER 60S RIBOSOMAL PROTEIN L19 1 79 IPR039547 GO:0003723|GO:0003735|GO:0022625
Pumo4g02705 109 MobiDBLite consensus disorder prediction 71 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02705 Pumo-Chr4 48593323 48593814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02705 1 81 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 69.136 4.03e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02705 K02885 - gmx:100816734 130.183