Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02703 ATGGGGAAGTTATCAAGCATGTTGTCGCACGATAAGTGCAAGAACCGCAAGGAATCATCATCATGGCCATTAACAAAGTGTTTTCACCATCATGGTAGTGGAAGAGATGTTGCAATTGGAATTGCACAAGAATGGAATGTTGATTTTTCTAATCTCTTAATTGGGCACAAGTTTTCTCATGGTGCTCATAGTCAAATTTACCATGGTACATACAAGGAGGAACATGTTGCTGTTAAATTTGTCAAGGTACGAGATAATGTCGAAAAGGGGATCTCAAAATCTCTTTTAGAGACACAATTTTCAAGAGAAGTCACATATCTTCCTCGTCTCCACCATCAAAATGTTGTGAAGTTTATAGGCGCATACAAAGACACTGATTTTCATTGCATTCTCACGGAGTATCAACAAAAGGGGTCATTGAGGGTGTATTTGAACAAGTTAGAGTCCAAGCCAATTTCTCTTAAGAGGGTGATAGCTTTTGCTTTGGACATTGCTCGTGGAATGGAGTATATACATGCACATGGTATCATTCATAGAGACCTTAAACCGGAGAATGTTCTTGTTGATGGCGAAATTCGCCTCAAAATCGCTGATTTTGGCATTGCTTGTGAGGCTTCAAAGTGTGACTCATTGAGAGGTACCTACCGTTGGATGGCACCGGAGATGATCAAAGGAAAACGCCATGGGAGAAAGGTTGATGTGTACAGTTTTGGGCTTATTTTGTGGGAGCTGGTGAGTGGAACAGTGCCATTTGAGGACATGAGTCCAATCCAGGTTGCTGTTGCAGTGGCAGATAGGGATTCAAGGCCAGTTATTCCTTCACATTGCCCTCATGTTTTGAGTGATTTGATGAAGCAATGCTGGGCCTTGAAACCAGAGAAGAGGCCTGAGTTCTGGCAGATTGTTCGAGTTTTGGAGCAATTAGATCAAGGCCGCAGCTTCCTGCATAAAAAAAAAACTCAAGCAACACCCCCTTTTGTTACAGAAACGATAATCCGGAATGCAAAACTACATTCTGGAATACCCTTTCGATAA 1035 0.4184 MGKLSSMLSHDKCKNRKESSSWPLTKCFHHHGSGRDVAIGIAQEWNVDFSNLLIGHKFSHGAHSQIYHGTYKEEHVAVKFVKVRDNVEKGISKSLLETQFSREVTYLPRLHHQNVVKFIGAYKDTDFHCILTEYQQKGSLRVYLNKLESKPISLKRVIAFALDIARGMEYIHAHGIIHRDLKPENVLVDGEIRLKIADFGIACEASKCDSLRGTYRWMAPEMIKGKRHGRKVDVYSFGLILWELVSGTVPFEDMSPIQVAVAVADRDSRPVIPSHCPHVLSDLMKQCWALKPEKRPEFWQIVRVLEQLDQGRSFLHKKKTQATPPFVTETIIRNAKLHSGIPFR 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02703 344 SMART serkin_6 52 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02703 344 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 45 312 - -
Pumo4g02703 344 SUPERFAMILY Protein kinase-like (PK-like) 37 305 IPR011009 -
Pumo4g02703 344 PRINTS Tyrosine kinase catalytic domain signature 213 223 IPR001245 GO:0004672|GO:0006468
Pumo4g02703 344 PRINTS Tyrosine kinase catalytic domain signature 232 254 IPR001245 GO:0004672|GO:0006468
Pumo4g02703 344 PRINTS Tyrosine kinase catalytic domain signature 276 298 IPR001245 GO:0004672|GO:0006468
Pumo4g02703 344 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672|GO:0006468
Pumo4g02703 344 PRINTS Tyrosine kinase catalytic domain signature 132 145 IPR001245 GO:0004672|GO:0006468
Pumo4g02703 344 Gene3D Phosphorylase Kinase; domain 1 41 136 - -
Pumo4g02703 344 CDD STKc_MAP3K-like 60 305 - -
Pumo4g02703 344 ProSiteProfiles Protein kinase domain profile. 52 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02703 344 Pfam Protein tyrosine and serine/threonine kinase 54 305 IPR001245 GO:0004672|GO:0006468
Pumo4g02703 344 Gene3D Transferase(Phosphotransferase) domain 1 137 336 - -
Pumo4g02703 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Pumo4g02703 344 FunFam Kinase suppressor of Ras 1 41 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02703 Pumo-Chr4 48582724 48583758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02703 4 308 MAP Kinase Kinase Kinase AT5G58950 54.545 6.19e-120 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pumo4g02703 PK_Tyr_Ser-Thr 3.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02703 - - gmx:100782673 570.852