Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02690 ATGTTGAATGTCAAGCACAAGGAGCAAACACACCTCCCAGATCCACATACAATGATTCTCATAATCTTCTCCATGTTCTTGGTACTCCTTCTTCAAATCCTATGGCACTTCAAATATTCAACAAAAGTCAAAAACTCAGCCCCTTCCCCTCCAAAATTTCCCATAATAGGTAACCTCCATCAAATTGGCTCATATCCTTACCGTTCACTCCAATCTTTAGCCCAAAAATATGGCCCCTTAATGCTGCTCCATCTCGGGAGGGTCCCGGTTCTCATTGTTTCATCTGCTGATGCTGCACGTGAGGTTATGAAAACTCACGACCGTGTCTTCTCAGACAGACCCCATAATAAAATGTTCGACATCCTTCTATACGGTTCCAAGGATGTCGCTGCGTCACCGTACGGAGAGTACTGGAGGCAGACAAGGAGCATCTCCGTCTTGCACCTTCTTAGCACCAAAAGGGTTCATTCGTTTCGCGCGGTTAGAGAAGAGGAAACTGAAATAATGATGGAAAACATTAGGAACTCTTGTTCTTTGCCACAGAATTTAAGTGAAACAGTATCTATGATTACCAACAACGTAGTTTGTCGGGTTGCATTGGGGAGAAAATACAGTGGAGAAAGGGGGAGGGAGTTCAACAAGTTGTTTTTGGAGTTTGTGGGGTTGCTTGGGAGTTTTGTTGTTGGGAACTTTGTGCCTTGGCTTGAGTGGTTGACCCGTGTTTCTGGATTGTATGGTAGAGCAAAGAGAGTGGCCAAAGGTTTTGATGAGTTTTTGGAGGAGGCAATTGAAGAGCATATAAATCGTCACAAAGGAGCCAACGAGGAGCATAGTGATTTTGTGGACGTTTTACTTTGGATCCAAAGGACAAACGCAGTTGGCTTTCCCATCGACAGAACCGTTGTCAAGGCTTTGACATTGGATATATTTGCAGCAGGTACAGACAATACATCGGTTATTTTGGAGTGGGCAATGTCAGAACTCTTAAGACATCCAATTGTGATGAAGAAACTACAAGACGAATGTAGAAGTGTGGCTGGTGATAGAAAACACATAACTGAAGATGATTTGGGTCAAATGCAATACTTAAAGGCAGTAGTGAAAGAAACTTTTCGCTTATATCCTCCACTCCCATTACTAGTCCCGCGACAAAGCATGCAAGACATCAAACTGAACGATTACCACTTTAAAGCGGGCACGCAAGTAATTGTCAATGCTTGGGCCATTGCAAGAGATCCCATGAATTGGGATGAACCTGAGGAGTTCAAACCTGAGAGGTTCTTAAATAGTTCAATAGATGTGAAAGGGAATGATTTTCAATTGATCCCATTTGGAGCAGGGAGGAGGGGGTGTCCAGGAACAATGTTTGCTATGGTTCTTAATGAGCTTGTTGTAGCCAACCTCGTCCATCAATTTGATTGGAAGTTACCAAGTGGAGACAAGACCTTGGACATGTCCGAAACAACTGGCTTAAGCATGCATAGAAAGAGTCCCCTCATGGCGGTTGCAATCCCGAAAAAGAAGTGA 1527 0.4361 MLNVKHKEQTHLPDPHTMILIIFSMFLVLLLQILWHFKYSTKVKNSAPSPPKFPIIGNLHQIGSYPYRSLQSLAQKYGPLMLLHLGRVPVLIVSSADAAREVMKTHDRVFSDRPHNKMFDILLYGSKDVAASPYGEYWRQTRSISVLHLLSTKRVHSFRAVREEETEIMMENIRNSCSLPQNLSETVSMITNNVVCRVALGRKYSGERGREFNKLFLEFVGLLGSFVVGNFVPWLEWLTRVSGLYGRAKRVAKGFDEFLEEAIEEHINRHKGANEEHSDFVDVLLWIQRTNAVGFPIDRTVVKALTLDIFAAGTDNTSVILEWAMSELLRHPIVMKKLQDECRSVAGDRKHITEDDLGQMQYLKAVVKETFRLYPPLPLLVPRQSMQDIKLNDYHFKAGTQVIVNAWAIARDPMNWDEPEEFKPERFLNSSIDVKGNDFQLIPFGAGRRGCPGTMFAMVLNELVVANLVHQFDWKLPSGDKTLDMSETTGLSMHRKSPLMAVAIPKKK 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02690 508 Coils Coil 256 276 - -
Pumo4g02690 508 PANTHER CYTOCHROME P450 71B11-RELATED 29 504 - -
Pumo4g02690 508 Gene3D Cytochrome P450 36 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02690 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Pumo4g02690 508 SUPERFAMILY Cytochrome P450 48 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02690 508 Pfam Cytochrome P450 48 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02690 508 FunFam Cytochrome P450 83B1 34 502 - -
Pumo4g02690 508 CDD CYP71-like 76 499 - -
Pumo4g02690 508 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02690 508 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02690 508 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02690 508 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02690 508 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02690 508 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02690 508 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02690 508 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02690 508 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02690 508 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02690 508 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02690 508 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02690 Pumo-Chr4 48239446 48244781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02690 42 503 Cytochrome P450 AT3G48270 53.763 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02690 - - gmx:100819183 625.935