Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02689 ATGACAGAAATCTTAAGACATCCAATTGTGATGAAGAAACTACAAGACGAGTGTAGGAGTGTGGCTGGTGATAGAAAGCACATAACTGAAGATGATTTGGGTCACATGCAATACTTAAAGGCAGTGATCAAAGAAACTTTTCGCTTGCATCCTCCACTCCCATTACTAGTCCCGCGACAAAGCATGCAAGATATCAAACTGAACGGTTACCACTTTAAAGCTGGCACGCAAGTAATTGTCAATTTTTGGACCATTGCAAGAGATCCCATGAATTGGGATGAACCTGAGGAGTTCAAACCTGAGAGGTTCTTAAATAGTTCAATAGATGTGAAAGGGAATGATTTTCAATTGATCTCATTTGGAGCAGGGAGGAGGGGGTGCCCAGGAACAATGTTTGCTATTGTTGTTAATGAGCTTGTTCTAGCCAACCTCGTCCATCAATTTGATTGGACATTACCAAGTGGGGACAAGTCCTTGGACATGCCCGAAACAGTTGGTTTAACCATGCATAGAAGAAAGAGTCCCCTCATGGCAGTTGCGGTCCCCAAAAAGAAGTAA 558 0.4265 MTEILRHPIVMKKLQDECRSVAGDRKHITEDDLGHMQYLKAVIKETFRLHPPLPLLVPRQSMQDIKLNGYHFKAGTQVIVNFWTIARDPMNWDEPEEFKPERFLNSSIDVKGNDFQLISFGAGRRGCPGTMFAIVVNELVLANLVHQFDWTLPSGDKSLDMPETVGLTMHRRKSPLMAVAVPKKK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02689 185 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Pumo4g02689 185 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02689 185 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02689 185 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02689 185 PANTHER CYTOCHROME P450 71B11-RELATED 1 181 - -
Pumo4g02689 185 Pfam Cytochrome P450 2 172 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02689 185 Gene3D Cytochrome P450 1 183 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02689 185 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02689 185 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02689 185 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02689 185 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02689 185 SUPERFAMILY Cytochrome P450 1 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02689 185 FunFam Predicted protein 1 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02689 Pumo-Chr4 48192328 48192885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02689 1 182 Cytochrome P450 AT3G48280 51.892 3.36e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02689 - - mtr:25493691 268.085