Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02688 ATGGCGCCGAAGAAGCCAAGAAGCGCGTCGAGGAACCCTGATTTGGTGAGGGGGATTGGGAAGTACTCCAGGTCCCAGATGTACCACAAGAGGGGCATCTGGGCCATCAAGGCCAAACACGGCGGCGTTTTGCCCCGCCACGAGCCCAAGCCCAAGCCCGAGGCCCCGGCCCAGAAGCCGCCCAAGTTCTACCCCGCCGATGATGTCAAGAAGCCCCTCGTCAACAAGCACAAACCAAAACCCGCGAAACTCAGGGCTAGCGTTACTCCAGGGACTGTGTTGATCCTGCTTGCTGGGAGGTTCAAGGGAAAGAGGGTTGTTTTCCTGAAGCAGCTTCCATCTGGATTGCTTCTTGTATCAGGTCCTTTTAAGATCAATGGTGTTCCTCTCAGAAGGGTGAACCAATCATATGTCATTGGTACATCCACAAAGGTGGACATCTCTGGTGTTAATGTTGATAAATTTGATGACAAGTACTTTGCCAAGGAAGCTAAGAAAAAGAAATCAAAGGGCGAAGGCGAGTTCTTTGAGGCAGAGAAGGAGGAGAAAAATGTGCTCCCCCAAGAAAAGAAAGATAACCAAAAAACCGTGGACACTGCTTTGTTAAAGGCCATTGAGAGTGTTCCGGACCTGAAGTCTTACTTGGGTGCTAGGTTTTCTTTGAAGGCAGGAATGAAGCCCCATGAACTAGTCTTCTAG 699 0.505 MAPKKPRSASRNPDLVRGIGKYSRSQMYHKRGIWAIKAKHGGVLPRHEPKPKPEAPAQKPPKFYPADDVKKPLVNKHKPKPAKLRASVTPGTVLILLAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFAKEAKKKKSKGEGEFFEAEKEEKNVLPQEKKDNQKTVDTALLKAIESVPDLKSYLGARFSLKAGMKPHELVF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02688 232 MobiDBLite consensus disorder prediction 39 81 - -
Pumo4g02688 232 MobiDBLite consensus disorder prediction 1 22 - -
Pumo4g02688 232 MobiDBLite consensus disorder prediction 41 55 - -
Pumo4g02688 232 FunFam 60S ribosomal protein L6 86 170 - -
Pumo4g02688 232 Pfam Ribosomal protein L6, N-terminal domain 4 60 IPR005568 GO:0003735|GO:0005840|GO:0006412
Pumo4g02688 232 SUPERFAMILY Translation proteins SH3-like domain 86 172 IPR008991 -
Pumo4g02688 232 CDD KOW_RPL6 80 232 IPR041997 -
Pumo4g02688 232 PANTHER 60S RIBOSOMAL PROTEIN L6 1 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
Pumo4g02688 232 Gene3D - 86 170 IPR014722 -
Pumo4g02688 232 Pfam Ribosomal protein L6e 125 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02688 Pumo-Chr4 48134343 48136665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02688 3 232 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 79.310 9.37e-120 338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02688 4 48134343 48136665 Pumo4g02688 4 48134343 48136665 ECH