Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo4g02679 | ATGGACAAGGGGGTGCCACCTAGCCTCTTCGTCAATGATGGTTCTTTCATGGAGAGGTTCAAGCAACTTCAACAAGAGCAGGAGAAAGGGAAGAATGTCAAATTAGAGGATTCTAAACCAATTAAGGTTATTTCAGGGTCTTTGTCTCCTAATCCCTCCATTACCAAAACACCTGTGGACTTGAAGGTTAATGATACAAGGAAAACATCCCAGGGTGGTTCCAGCGGCAAGCTAGCTTTCAGTTTAAAACAAAAGTCAAAGCTGGTGCCACCCCCTGTTAAGTTGAGTGCTGATGAGGATGAAGAAGAAACAGAAGCTGGGTATGTTTCAAATGATGCACCACTAAAACGGCAAAAGTTAGGCCAGGAGGAAAGCATTGACCAATCATCAAGACAACTTGATGTTGCACCTTCTTCCCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAACTAGCAAGTTTTGTGGCTAAAAATGGAAGGCAGTTTGAGGATGTAACACGTCAAAAAAATCCGGGGGATACACCTTTCAAATTTTTATTTGATGAGAGATGTGCTGAATACAAGTATTATGAATATCAGCTTGCTCAAGAAGAAAAGGCTCTTGCACAATCAAGGGAATCACAGGTGCCTCGTAATGGGGGTTCAAGCATTTCATCTTCCAAACAAACTAGTGGTCATCAAAGATCATCTCAGCAGCAGCATACAGCCTACCAAATTCCTGCATCTGCTTTATATGAAAGTGCTGACAATCCAAGAGCTTCTGGATCTTCAATTCATACATCATCAGTAGGAAGCAGTGAAGAGCCCAGTGGTTCATCAAATGCTGATTCTTTGGCACTAATGGAGTTCTACATGAAGAAAGCTGCACGGGAAGAGAAGTATAAACAACCTAAGCACTCAAAAGATGAGATGCCCCCTCCTGCTTCTCTTCAAGGCAAAAAAGGCCATCACATGGGTGATTTCATTCCTCAAGAAGAACTTGAGAAGTTCTTGGCTACCTGTAATGATGCTGCAGCGCAGAAAGCTGCAAGGGAGGCTGCAGAGAGGGCTAAGATTCAGGCTGATAATGTAGGCCACAGGCTCCTGTCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTGGGTGGATCCAGGAAGGGTATTTCGGATCCTATCATGGCTGGTAATGTTAAGAAGAATAACTTGGGGGTTGGTGCTGAGGAACCTGGGGAGGTGACTGCTGAGGATGACATATACGAGCAGTACAAAAAGCGAATGATGCTTGGCTACCGTTACAGACCTAATCCTCTGAACAATCCCCGCAAGGCTTATTACTGA | 1317 | 0.4419 | MDKGVPPSLFVNDGSFMERFKQLQQEQEKGKNVKLEDSKPIKVISGSLSPNPSITKTPVDLKVNDTRKTSQGGSSGKLAFSLKQKSKLVPPPVKLSADEDEEETEAGYVSNDAPLKRQKLGQEESIDQSSRQLDVAPSSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDERCAEYKYYEYQLAQEEKALAQSRESQVPRNGGSSISSSKQTSGHQRSSQQQHTAYQIPASALYESADNPRASGSSIHTSSVGSSEEPSGSSNADSLALMEFYMKKAAREEKYKQPKHSKDEMPPPASLQGKKGHHMGDFIPQEELEKFLATCNDAAAQKAAREAAERAKIQADNVGHRLLSKMGWKEGEGLGGSRKGISDPIMAGNVKKNNLGVGAEEPGEVTAEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY | 438 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo4g02679 | 438 | MobiDBLite | consensus disorder prediction | 23 | 38 | - | - | |
Pumo4g02679 | 438 | SMART | G-patch_5 | 353 | 400 | IPR000467 | GO:0003676 | |
Pumo4g02679 | 438 | MobiDBLite | consensus disorder prediction | 201 | 241 | - | - | |
Pumo4g02679 | 438 | ProSiteProfiles | G-patch domain profile. | 355 | 402 | IPR000467 | GO:0003676 | |
Pumo4g02679 | 438 | MobiDBLite | consensus disorder prediction | 201 | 315 | - | - | |
Pumo4g02679 | 438 | MobiDBLite | consensus disorder prediction | 125 | 139 | - | - | |
Pumo4g02679 | 438 | MobiDBLite | consensus disorder prediction | 44 | 81 | - | - | |
Pumo4g02679 | 438 | ProSiteProfiles | SURP motif repeat profile. | 148 | 191 | IPR000061 | GO:0003723|GO:0006396 | |
Pumo4g02679 | 438 | MobiDBLite | consensus disorder prediction | 23 | 146 | - | - | |
Pumo4g02679 | 438 | MobiDBLite | consensus disorder prediction | 286 | 303 | - | - | |
Pumo4g02679 | 438 | SUPERFAMILY | Surp module (SWAP domain) | 132 | 199 | IPR035967 | GO:0003723|GO:0006396 | |
Pumo4g02679 | 438 | Pfam | Surp module | 147 | 196 | IPR000061 | GO:0003723|GO:0006396 | |
Pumo4g02679 | 438 | Gene3D | Surp module | 119 | 205 | IPR035967 | GO:0003723|GO:0006396 | |
Pumo4g02679 | 438 | SMART | surpneu2 | 146 | 200 | IPR000061 | GO:0003723|GO:0006396 | |
Pumo4g02679 | 438 | Pfam | G-patch domain | 356 | 400 | IPR000467 | GO:0003676 | |
Pumo4g02679 | 438 | PANTHER | ARGININE/SERINE RICH SPLICING FACTOR SF4/14 | 2 | 438 | IPR040169 | - | |
Pumo4g02679 | 438 | MobiDBLite | consensus disorder prediction | 250 | 278 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo4g02679 | 351 | 411 | C2H2 Transcription Factor Family | AT5G26610 | 48.387 | 4.66e-10 | 58.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo4g02679 | K13096 | - | gmx:100786213 | 790.03 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo4g02679 | 4 | 47966699 | 47973463 | Pumo4g02679 | 4 | 47966699 | 47973463 | ECH |