Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02630 ATGGCTGCCATTTCTTTTAGGCTATGTTGTATTTTTGTGATGATAATCATATTCCAAGCCAGCGCCCAGAGTCCATCCTGTGATAACAGAAAAGGCAACTACACAATAAACAGCACCTATCACAGCAACCTCAACACCCTTTTGTCCAGTTTCTCTTCCCACACACAAATTAACTACGGTTTCTACAACTTCTCATATGGCCAAGGCATCGACAAAGCATATGCCATCGGCATCTGTACAAGTGATTGTAAGTCAGACGAATGCCTCAAATGCCTCAACGAGTCCAGATTCACTCTCGCGCAACTTTGTCCAAACCAGAAGGAGGCAATTCTGTGGAATCCTTTTTGCACGTTGCGCTACTCGAACCGCTCGATATTCAGCATCATGGAAAATCAACCTACGGTGGAGCTTTTCTACACGTTGGACGCGAAGGGTCCGGCGGATCAATTCAGCGAAGCGCTGGAGAGCTTGATGAGAAATCTAACGTGCGCGGCTGCATCGGGCAACTCTCGTCGGAAGTATGCTACGGGTAGCACACCTGCTCCGGAGTTTCAAACCATATACGGTCTTACACAGTGCATGCCTGATATGTCATTGCAAGATTGCACCAAGTGTTTGGATGAAGCTGTCTCAAGAATCCCGTATTGTTGTAGTGGCAAGGCTGGAGGCAATGTTTTAAAGCCCAGTTGTAGAATTAGATTTGACCCCTACATCTTCTACGGACCTACACTGAAATTAGACCCAGATGCACCATCACTTGCCACCAACAACACTTCCTCTTCACAAGGAAAGAGCAACACATCACGAACTACTATCATCGCCATAACAGTGCCAGCTGGTAGTGTTGTTATAGCGCTCAGTCTTTTCTGCATCTATCTAAAAGTGAGGAAGCCAAGAAAGAAAATTGAAAGTAAAGAAGAAGATAGTGATGAAGATGAAATTACATTTGCTGAGTCATTGCAATCCAACTTTGACACCATACGAGTTGCTACAAACGAATTCGATGATTCTAATAAACTTGGACAAGGCGGGTTTGGAGCTGTTTACAGAGGTCAGCTTTCCAGTGGACAAGAGATTGTTGTCAAAAGGTTGTTAAGGGATTCTGGGCAAGGAAATATGGAATTTAAGAATGAAGTGTTTTTAGTGGCCAAGCTTCAGCATCGAAATTTAGTTAGGCTACTTGGTTTCTGTCTCGAAGGAAGAGAAAGGCTACTTGTCTATGAATATGTTTCTAATAAAAGCCTTGATTACTTCATATTTGATTTTGGGACAGCAAGATTGTTTCAATTGGATCAAACTCAAGGAAATACAAGTAGAATTGTTGGAACCTATGGATATATGTCACCTGAGTATGCAATATATGGTCAGTTTTCAGTAAAATCAGATGTTTTTAGTTTTGGTGTTCTGGTTCTTGAGATTGTAAGTGGCCAAAAAAATAGTGGTGTTCGGCATGGGGAGAATGTGGAGGATCTATTGACATTTGCATGGCAAAATTGGAAAGGTGGAACAACTACAAATATTGTAGATCCCACATTAAACAATGGTTCACGAAATGAAATAATGAGATGCATCCACATTGGGTTATTATGTGTTCAAGAAAATGTGGCTACCATACCAACCATCGCTTCTGTTGTACTCATGCTTAATAGCTATTCTATCACTCTCCCGTTACCTTCAAAACTTGCATTTGTCGTGGATAGTAGAACCAGAAACCTTCCAGACATGCAATTCTCAGAGCATAATTCAAGGGAAACAAGATCCGGTGAATTGACAAATAAATCAACTCAAAATTCGGTAAATGAGGCTTCGATTACTAAGCTATTTCCTCCTTAG 1833 0.4157 MAAISFRLCCIFVMIIIFQASAQSPSCDNRKGNYTINSTYHSNLNTLLSSFSSHTQINYGFYNFSYGQGIDKAYAIGICTSDCKSDECLKCLNESRFTLAQLCPNQKEAILWNPFCTLRYSNRSIFSIMENQPTVELFYTLDAKGPADQFSEALESLMRNLTCAAASGNSRRKYATGSTPAPEFQTIYGLTQCMPDMSLQDCTKCLDEAVSRIPYCCSGKAGGNVLKPSCRIRFDPYIFYGPTLKLDPDAPSLATNNTSSSQGKSNTSRTTIIAITVPAGSVVIALSLFCIYLKVRKPRKKIESKEEDSDEDEITFAESLQSNFDTIRVATNEFDDSNKLGQGGFGAVYRGQLSSGQEIVVKRLLRDSGQGNMEFKNEVFLVAKLQHRNLVRLLGFCLEGRERLLVYEYVSNKSLDYFIFDFGTARLFQLDQTQGNTSRIVGTYGYMSPEYAIYGQFSVKSDVFSFGVLVLEIVSGQKNSGVRHGENVEDLLTFAWQNWKGGTTTNIVDPTLNNGSRNEIMRCIHIGLLCVQENVATIPTIASVVLMLNSYSITLPLPSKLAFVVDSRTRNLPDMQFSEHNSRETRSGELTNKSTQNSVNEASITKLFPP 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02630 610 FunFam Cysteine-rich receptor-like protein kinase 10 136 239 - -
Pumo4g02630 610 Gene3D - 21 124 IPR038408 -
Pumo4g02630 610 Gene3D - 139 239 IPR038408 -
Pumo4g02630 610 MobiDBLite consensus disorder prediction 588 604 - -
Pumo4g02630 610 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 20 125 - -
Pumo4g02630 610 SUPERFAMILY Protein kinase-like (PK-like) 324 579 IPR011009 -
Pumo4g02630 610 ProSiteProfiles Protein kinase domain profile. 334 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02630 610 ProSiteProfiles Gnk2-homologous domain profile. 132 239 IPR002902 -
Pumo4g02630 610 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Pumo4g02630 610 Pfam Protein tyrosine and serine/threonine kinase 338 419 IPR001245 GO:0004672|GO:0006468
Pumo4g02630 610 Pfam Salt stress response/antifungal 27 122 IPR002902 -
Pumo4g02630 610 Pfam Salt stress response/antifungal 147 235 IPR002902 -
Pumo4g02630 610 ProSiteProfiles Gnk2-homologous domain profile. 22 125 IPR002902 -
Pumo4g02630 610 Gene3D Phosphorylase Kinase; domain 1 296 405 - -
Pumo4g02630 610 MobiDBLite consensus disorder prediction 574 610 - -
Pumo4g02630 610 Gene3D Transferase(Phosphotransferase) domain 1 406 555 - -
Pumo4g02630 610 FunFam Cysteine-rich receptor-like protein kinase 10 296 409 - -
Pumo4g02630 610 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 42 420 - -
Pumo4g02630 610 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 428 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02630 Pumo-Chr4 46868540 46873216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02630 4 567 Receptor kinase-like Gene Family AT4G21410 41.113 8.58e-156 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo4g02630 Stress-antifung 6.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02630 - - gmx:113000777 816.609