Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02625 ATGCGAAATCAGATTGTTATACCTGTCTTCTATCAAGTAGATCCGTCAGACGTAAGGCATCAGAGGGGTAGTTACGATATCGTGTTCGCAAAGCATGAGCTAGATGCTGCAGCGAATAGTACCCAATCCAATAACGAACAAAAAGTGTCTAAATGGAAAGATGCTCTCGCTGAAGCAGCCAACATATCTGGATGGCACTCTAAGAAAGATAAGGACGAATCTCTTGTCATCAAGGATATTGTCGGAGATGTATCGCAAAAGCTTTGCCTGCGAGACCCTATTGAACAAAAGGGCCTTGTCGGAAATGAACAAAATTGTAGAAATGTAGAATCCTTAATAAATAAATATAGGGTCATTGGAATTTGGGGTATGGGCGGCATTGGTAAGTCAACCATTGCTAAAGTCTTGTTTGCCAAACTCTTTCACGAATTTGATCATGTCTGCTTGGTGGACAATGCCAAAGAATATTGGCTCCATAAGCTTTTCACTGCGCTATCGAAGGAGAAAGTTTCCCCAGCAAATGTCGACATCGTAAGATTAACATCTCATATGAGGAGACTCAGCAGCAAGAAGATTCTCATTGTACTTGATGATGTTAATATAGATAGTTCAGAACCATTTGAATATTTATATAAAGAGTATGGTGTCCAACATGACCATAGTAGACTCATTGTAACAACAAGAGATAAGCATTTGCTTGAAGGAAGGGTTGATAGGATATACGAGGTCAAGGAATGGCAAAATCCAAAACCTCTTGAGCTTTTTTGCTTAGAGGCCTTCAACAGAAGCTCTCCCATAGAAGGTTATGAGAGTCTCTCAGATAGAGCAGTAAAGTATGCTGGGGGCGTTCCTTTAGCTCTTAAAGTTTTGGGTTCACATTTTCGTAGTATAACTTCTCCTGAATTTTGGGAAAGTACTTTAAGAATGCTCGACAATTATCCTAATCAGAAAATTCAGAGAGTGTTAGAAGTGAGCTACAATGGATTACATCTTCTAGAAAGGAATATATTTCTAGACATTGCATTTTTTTTCAAAGAAAACGAGATAGATCATGTCATAAGTATATTAGATGCCTGTGGTTACGAAGCAACTAGTAGAATAAAAGTTCTTGCAGACAAAGCTTTGTTAACTATTTCAAAGAGCACGATAATACAAATGCATGACTTGCTGCAACAAATGGGTTTGGAGATAGTACGTCTAGAAGATGAAGATGATCCTGGAAAACGTAGTCGATTGAAGGATAATGAAGCTCGTGAAGTGATTGAAGAGAACAAGGTAACTCGTGCAATTCAAGGCATAGCATTAGATTTGTCTCAACTTAAAGATTCACCTTTGAGTTTGCACGCTGACACATTCACAAAGATGAAAGCCTTAAGAATTCTGAAATTCTATAACACCTTGGGGTACATTGAGTGGATTGGATACCCTTTTGAGTCTCTTCCATCACCTTTTTGTGCTAAGTTTCTAGTTGAGATTCACATGCCACGGAGCAAAGTTAAAAAACTTTGGCAGGGGATGCAGGAACTTGATAATTTAGAGGTAATTGACCTAAGTGAATGCCAACAGTTTGAAGAGCTTCCAGATTTGTCTAAGGCACCAAGACTTAAATGGGTGAATCTCTCCTGTTGTGAAAGTTTGAGATATCTTGATCCATCTGCTTTATCCTCGGACATGCTTGTTACTTTGATACTGGATGGGTGTACAAAGCTTGAGAGTGTTACAGGTGAGAAGCATTTAAAATCTCTAGAGAAGATCAGTGTCAATGGCTGCTCAAGTCTGAAGGAATTTGCAGTGTCATCAGATTTAATTGAAAACTTGGATTTGAGCAATACAGGAATCCAAACATTGGGCCCACAAATAGGCCGTATGCATAATCTTAAATGGCTCAATCTAGAGGGTTTAAGACTCAGGCATCTTTTAGAGGAGTTATCTTGCTTGAAATCTCTCAGGGAGCTGAAGCTTTGTGATACTTGGCAAGTAATTGATAAAGAGCGACTAAGTGTCCTGTTTAATGGGTTAAGTAATTCCCTACGAAAACTACATATGAAGGATATGCGTAACTTATTTGAACTCCCCCACAACATCTATTTGTTATCAAAATTGCAAGAACTAAGGCTAGATGGAAGCAATGTGAAAAGGTTGCCTGGGAGCATTATTAATCTTCAAATGTTGGAAATTCTGTCCTTGGAGAACTGCGAGAAGCTTCTGTGCCTGCCATGGTTGCCATCCCGCATCCAATACGTAGGTGCCATTAACTGCACGTCATTGGAGTCGGTGTCAAGCTTAAACTCTTTGAACAGTTTGAAATTAGATGAACATTCATGGGAACGTATTATGGAAAGCCTCCAGTTAGCAATGATGCATGCTGCATTTGGCAATGTGATAAATAGATACAGTTCCAGACACGGCTACAATTATAACAGTGTTGCGCTTTGTTTACCAGGGAGCAGGGTCCCATGGCAGAACAAACATGGGACCACTAAGTCCTCCATTACCATTGAACTTCCCAAATATCCCAACTCGCTGGGCTTAGTTTACTGGGTGGTTCTTTCTCCAGCTGGTGGAACGAAGAAGCATGGCGCTAAGATAAAATGTATATGCCACTTGCCAAAAGGTACTATGAGCGAAGAATGGCTATCTGGTTATATTGGGGGATTGAACTCAGATCATGTTTATGTATTCTATGATGCATACCACAGTGACAACTTTCTAATGTATCGACAAAAGGTTCGTTTTGAGTTCTGTGTTGCAAATGATAAGGGGGAAGTTGACGGTTCAATCTGTATTAAAGAGTGTGGGATACGCCTCATAGGTGTTTCAGACTTGCCGAATGTTTTAGAAGAGTTGGACTTGGAGAAGGGAGTGGAGTTGGAAACAGGACAAAGGAGAACCTTCACATCAATGGAGGAACCATCTGATGAGGAGGAAAGCAAACCCTCTGATAGTATACTCGATACAAAATCAAACTCAAAGATGGTTCAGCCAGATTCAGCTGAAGAAGGTGCAAAATCAAACTCGGAGATGGTTGAAGCATATTCTGCTGAAGAAGGTACGAAATCAAATTCAGAGATGGTTGAACCAGATTCAGCTAAAGAAGGTAATGAGAGGAAAACCTTTATTCTAATGTGGAAGAATTTTTTTTGA 3144 0.3982 MRNQIVIPVFYQVDPSDVRHQRGSYDIVFAKHELDAAANSTQSNNEQKVSKWKDALAEAANISGWHSKKDKDESLVIKDIVGDVSQKLCLRDPIEQKGLVGNEQNCRNVESLINKYRVIGIWGMGGIGKSTIAKVLFAKLFHEFDHVCLVDNAKEYWLHKLFTALSKEKVSPANVDIVRLTSHMRRLSSKKILIVLDDVNIDSSEPFEYLYKEYGVQHDHSRLIVTTRDKHLLEGRVDRIYEVKEWQNPKPLELFCLEAFNRSSPIEGYESLSDRAVKYAGGVPLALKVLGSHFRSITSPEFWESTLRMLDNYPNQKIQRVLEVSYNGLHLLERNIFLDIAFFFKENEIDHVISILDACGYEATSRIKVLADKALLTISKSTIIQMHDLLQQMGLEIVRLEDEDDPGKRSRLKDNEAREVIEENKVTRAIQGIALDLSQLKDSPLSLHADTFTKMKALRILKFYNTLGYIEWIGYPFESLPSPFCAKFLVEIHMPRSKVKKLWQGMQELDNLEVIDLSECQQFEELPDLSKAPRLKWVNLSCCESLRYLDPSALSSDMLVTLILDGCTKLESVTGEKHLKSLEKISVNGCSSLKEFAVSSDLIENLDLSNTGIQTLGPQIGRMHNLKWLNLEGLRLRHLLEELSCLKSLRELKLCDTWQVIDKERLSVLFNGLSNSLRKLHMKDMRNLFELPHNIYLLSKLQELRLDGSNVKRLPGSIINLQMLEILSLENCEKLLCLPWLPSRIQYVGAINCTSLESVSSLNSLNSLKLDEHSWERIMESLQLAMMHAAFGNVINRYSSRHGYNYNSVALCLPGSRVPWQNKHGTTKSSITIELPKYPNSLGLVYWVVLSPAGGTKKHGAKIKCICHLPKGTMSEEWLSGYIGGLNSDHVYVFYDAYHSDNFLMYRQKVRFEFCVANDKGEVDGSICIKECGIRLIGVSDLPNVLEELDLEKGVELETGQRRTFTSMEEPSDEEESKPSDSILDTKSNSKMVQPDSAEEGAKSNSEMVEAYSAEEGTKSNSEMVEPDSAKEGNERKTFILMWKNFF 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02625 1047 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 596 IPR044974 GO:0006952
Pumo4g02625 1047 MobiDBLite consensus disorder prediction 960 1034 - -
Pumo4g02625 1047 Pfam NB-ARC domain 117 326 IPR002182 GO:0043531
Pumo4g02625 1047 Gene3D - 247 330 IPR042197 -
Pumo4g02625 1047 Gene3D - 90 239 IPR027417 -
Pumo4g02625 1047 Gene3D - 1 89 IPR035897 -
Pumo4g02625 1047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 340 IPR027417 -
Pumo4g02625 1047 Pfam TIR domain 2 94 IPR000157 GO:0007165
Pumo4g02625 1047 MobiDBLite consensus disorder prediction 967 982 - -
Pumo4g02625 1047 ProSiteProfiles TIR domain profile. 1 88 IPR000157 GO:0007165
Pumo4g02625 1047 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 65 IPR035897 -
Pumo4g02625 1047 MobiDBLite consensus disorder prediction 983 1001 - -
Pumo4g02625 1047 PRINTS Disease resistance protein signature 507 523 - -
Pumo4g02625 1047 PRINTS Disease resistance protein signature 186 200 - -
Pumo4g02625 1047 PRINTS Disease resistance protein signature 280 294 - -
Pumo4g02625 1047 PRINTS Disease resistance protein signature 118 133 - -
Pumo4g02625 1047 Gene3D Ribonuclease Inhibitor 602 786 IPR032675 -
Pumo4g02625 1047 Gene3D Ribonuclease Inhibitor 412 601 IPR032675 -
Pumo4g02625 1047 Pfam Leucine Rich Repeat 488 505 IPR011713 -
Pumo4g02625 1047 SUPERFAMILY L domain-like 386 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02625 Pumo-Chr4 46708529 46714594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02625 3 704 WRKY Transcription Factor Family AT4G12020 31.698 2.61e-75 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02625 - - vun:114165831 1132.47