Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02624 ATGTCTTCCGTTGCCAAAAAGCACGATGTATTTGTGAGCTTCAGAGGAGAGGACACCCGATCCAACTTCACTAGCCATCTTCGTGAAGCTCTGTGCCAGGAATCAATCGACACATTCATAGATGACAAGCTTCCAAGAGGACAAAATGTTTGGGAAGCAATTGCAGCAGCAATCGAGGCATCACGTGTGTCCATCGTTGTTTTCTCCGAAAAATATGCTACCTCCAGATGGTGCTTGGATGAACTGGTCAAAATACTTGAGTGCAGAAGAATGCGAAATCAGATTGTTATACCTGTCTTCTATCAAGTAGATCCGTCAGACGTAAGGCATCAGAGGGGTAGTTACGATATCGTGTTCGCAAAGCATGAGCTAGATGCTGCGGCGAATAGTACCCAATCCAACGAACAAAAAGTGTCCAAATGGAAAGATGCTCTGGCTGAAGCAGCCAATATATCTGGATGGCACTCTAAGAAAGATAAGGACGAATCTCTTGTCATCAAGGATATTGTCGGTGATGTATCAGAAAAGCTTTGCCTGCGTGACCCTATTGAACAAAAGGGCCTTGTAGGAAATGAACAAAATTGTAGAAATGTAGAATCCTTACTATATACACATAGGGTCATTGGAATTTGGGGTATGGGCGGCATTGGTAAGTCAACCATTGCTAAAGTCTTGTTTGCCAAACTCTTTCACGAATTTGATCATGTCTGCTTGGTGGACAATGCCAAAGAATATTGGCTCCATAAGCTTTTCTCTGCGCTATCGAAGGAGAAAGTTTCCCCAGCAAATGTCGACATCATAGTTCAGAACCATTTGAATATTTATATAGAGTATGGTGTCCAACATGACCATAGTAGACTCATTGTAACAACAAGAGATAAGCATTTGCTTGAAGGAAGGGTTGATAGGATATACGAGGTCAAGGAATGGCAAAATCCAAAACCTCTTGAGCTTTTTTGCTTAGAGGCCTTCAACAGAAGCTCTCCCATAAAAGGTTATGAGAGTCTCTCATATAGAGCAGTAAAGTATGCTGGGGGCGTTCCTTTAGCTCTTAAAGTTTTGGGTTCACATTTTCGTGGTATAACTTCTCCTGAATTTTGGGAAAGTACTTTAAGAATGCTCGACAATTATCCTGATCAGAAAATTCAGAGAGTGTTAGAAGTGAGCTACAATGGATTACATCTTCTAGAAAGGAATATATTTCGAGACATTGCATTTTTTTTCAAAGAAAACGAGATAGATCATGTCATAAGGATATTAGATGCCTGTGGTTATGAAGCAACTAGTAGAATAAAAGTTCTTGCAGACAAAGCTTTGTTAACTATTTCAAAGAGCAGGATAATACAAATGCATGACTTGCTGCAACAAATGGGTTTGGAGATAGTACGTCAAGAAGATGAAGATGATCCAGGAAAACGTAGTCGATTGAAGGATAATGAAGCTCGTGAAGTGATTGAAGAGAACAAGGGAACTGATGCAATTCAAGGCATAGCATTAGATTTGTCTCAACTTAAAGATTCTCCTTTGAGTTTGCACGCTGACACATTCACAAAGATGAAAGCCTTAAGAATTCTGAAATTCTATAACACCTTGGGTCTGATTTCTAGTAATACATATCTCAACCTTCCGGCAACTCTTGAGCGGTTTTCTGATAAACTGAGGTACATTGAGTGGATTGGATACCCTTTTGAGTCTCTTCCATCACCTTTTTGTGCTAAGTTTCTAGTTGAGATTCACATGCCACGGAGCAAAGTTAAAAAACTTTGGCAGGGGATGCAGGAACTTGATAATTTAGAGGTAATTGACCTAAGTCAATGCCAACAGTTTGAAGAGCTTCCAGATTTGTCTAAGGCACCAAGACTTAAATGGGTGAATCTCTCCTGTTGTGAAAGTTTGAGATATCTTGATCCATCTGCTTTATCCTCGGACATGCTTGTTACTTTGATACTGGATGGGTGTACAAAGCTTGAGAGTGTTACAGGTGAGAAGCATTTAAAATCTCTAGAGAAGATCAGTGTCAATGGCTGCTCAAGTCTGAAGGAATTTGCAGTGTCATCAGATTTAATTGAAAACTTGGATTTGAGCAATACAGGAATCCAAACATTGGGCCCACAAATAGGCCGTATGCATAATCTTAAATGGCTCAATCTAGAGGGTTTAAGACTCAGGCATCTTTTAGAGGAGTTATCTTGCTTGAAATCTCTCAGGGAGCTGAAGCTTTGTGATACTTGGCAAGTAATTGATAAAGAGCGACTAAGTGTCCTGTTTAATGGGTTAAGTAATTCCCTACGAAAACTACATATGAAGGATATGCGTAACTTATTTGAACTCCCCCACAACATCTATTTGTTATCAAAATTGCAAGAACTAAGGCTAGATGGAAGCAATGTGAAAAGGTTGCCTGGGAGCATTATTAATCTTCAAATGTTGGAAATTCTGTCCTTGGAGAACTGCGAGAAGCTTCTGTGCCTGCCATGGTTGCCATCCCGCATCCAATACGTAGGTGCCATTAACTGCACGTCATTGGAGTCGGTGTCAAGCTTAAACTCTTTGGTAAAAGTGATGTTGGGAACGACCAAATTCATTACATTCAAGAACAGTTTGAAATTAGATGAACATTCATGGGAACGTATTATGGAAAGCCTCCAGTTAACAATGATGCATGCTGCATTTTACAATGCAATAAATAGATACCGTTACGAACACGGCTACAATTATAACAGTGTTGCGCTTTGTTTACCAGGGAGCAGGGTCCCATGGCAGAACAAACATGGGACCCCTAAGTCCTCCATTACCATTGAACTTCCCAAATATTCCTACTCGCTGGGCTTAGTTTACTGGGTGGTTCTTTCTCCAGCTGGTGGAACGAAGAAGCATGGAGCTAAGATAAAATGTATATGCCACTTGCCAGAAGGTACTATGAGCGAAGAATGGCTATCTGGTTATATTGGGGGATTGAACTCAGATCATGTTTATGTATTCTATGATGCATACCACTGTGACAACTGTCTAAGATATAAGCAAAAGGTTCGTTTTGAGTTCTGTGTTGCAAATGATAAGGGGGAAGTTGACGGTTCCATCTGTATTAAAGAGTGTGGGATACGCCTCATAGGTGTTTCAGATTTGCCGAATGTTTTAGAAGAGTTGGACTTGGAGAAGGGAGTAGAGTTGGAAACAGGACAAAGGAGAACCTTCACATCAATGGAGGAACCATCTGATGAGGAGGAAAGCAAACCCTCTGATAGTATACTTGGTACAAAGTCAAACTCAAACTCAAAGATGGTTCAACCAGATTCGGCTGAAGAAGGTACAAAATCAAACTCGGAGATGGTTGAAGCATATTCTGCCGAAGAAGGTACGAAATCAAATTCAGAGATGGTTGAACCAGATTCAGCTAAAGAAGGTATAATATCATACTCAAAAATGATTGAACCAAATTCAGCTGAAGGTAATGGAAAGAAAAACCATTATTCTGATGTGGAGGAGAGCATCAATTCTACTCACAAGGAAACCAAAACTGATTCAGGAATAGACTGTAATCAGAATACCAGAGAGTCTATAAATGCAGTCAAATACGAAGGAAATAAAGGAAGGTCAATTAAACCAGATGCAACTGTTGCGTCTGAGTTAGACAAAGAAAACGAGTCTAAAGAAAAGTCAAGACCAAAGTCAGCGATGGATGAACTGGAATCAGTTGAGGACAATAATGGGAGGAAAGATTATTTTTATGATGTGGAAGAGAACACTGGATATACTCACGAGGAAATTAAGATTGGTGCTGGAAGCAGGGAGAGTATCACAGAGTACACAGAAGATGTCAAAAACAAAGGAAATAAAAGAATGCCAGTTGAACGTGATGCCAGTTTGCATGACCTTATTATAGAATCACAACTAAAGACAGAATATTACGAGTGCGAAGACAAGTCAATCACACAATCAAAGTTAGTAGGGATGATTGAACTAGAATCAGCTAAAGACAATAATGGGAGTAAATATTTTTCTGGTGTTGAAGAGAGCATTGAATCTGCTTGCAAGGCAACCATGACCACTGCTAGAAGAGGTCCCGAAGAGAAATCCACGAAGTCTACCAAACTTGTGCAGGTCCAAAGCAAAGGAAATGATGGAATGCTAGTTGAATCTAATGCTAGATTGTATGAACCTGTTGAATCACAGCCAGACAAAGAAAATGCGTCTGAAGACAATTCAAAACCAAAGTTAATGATAGTTGAAGGAGAATCACCTAAAGATGATGCGAACGAAGACCATTTTTTTGACGTGAGCAAAAGATCTATGCACAAGGAAACCAAGGCCAATGCTAGAAGGGGTCACAAGGAGAATACCACACAGTCTACAGAAATTATAATTGAAGATACTTTTGCTTTGGAAGTAGTATCTGAACGAGAAGATGACACTGCTGAAGGCGGGGCTCAAATTTCACAATCCAAGACTGAGAATGTTGACAACGAGATTCTTTCTGAACCTGCTGCTGAAAAAAGACCCAATGTTGAGGCTGAAAACCAAAAGCAGCCAATAATCGAGCTAGAAGACAAAGAGTTATCTTCGAGTTCTGAAGAACCTAAGGACCCAGGCCAAAAGGAATTAAGTGATGCAACTTCTGCGCCTAACAATGTTCCAGAAAAACCTCTCCAAGAGGATCCTGACCAAGAGCTAAGCTCGAGTACTTCAGTCAAGACCAAGAGCAATCATCCTAACAGCTCAACTCCTGAATGCACTCCCATGAATCTTGATGATTGCTTGAACCAAGTGGAAGAAAATCCCTTTATCTTGCTCGACTTTATGTCAAGGGAACTATCAATTTCTTCAAAGCGGTCTGAATCAAGTGATCAAATTTCCTCAACAAAGGAGAATTTTGAAGCTGCTTTAGAAGAACTTCGAGAACTGGCTTTTTCCCAACCTATGACGAAAAATGTTAAAGATGTTGAATATCGAGAAAAGCTTGAAGCCGCTGCTCAAAAACTTGAAAAATTTCCCCAAGAATTAAATGAAGAGCTAAATGGGAAAATCAAGTCCTTCTTCGATCTCTACAATCAAGCATGTGAAATTGTAAAGGAACAAGAAGTAACTTGTGATACTATTACTCAGGTTATCGCAGAAAAAGATGCTGGTTTTGACAAACTGCAAACTGCGAAGAACCAAGTTAAACAGATCGAAGATGCAATTGGAGAATGCAAGCCGAAAATCGAAGAACTCGAAAAGCGTGAGAATGATCTCAATGACAAAATAAGGAAATTACAGGAGGAACTAAGTGGTGTTGAAAAAGACAAGGCAAAGCTCGAAACTGCCCAAGGAAAGAATATTGCTAAGAAGACAGGTTTTGTCGCTTCAGCAAGACATGTCTCAACCAACTTGGGCAGGCTCCTTAAACAAAAGGAGGAGCTTGAAAAGTCACAGGCCAAACTTGACATAGGTTTTGAGGCCTTAGAAAAACGTTACAATAAGATGAGAGGTGAGCCTCATTTTTAG 5484 0.4006 MSSVAKKHDVFVSFRGEDTRSNFTSHLREALCQESIDTFIDDKLPRGQNVWEAIAAAIEASRVSIVVFSEKYATSRWCLDELVKILECRRMRNQIVIPVFYQVDPSDVRHQRGSYDIVFAKHELDAAANSTQSNEQKVSKWKDALAEAANISGWHSKKDKDESLVIKDIVGDVSEKLCLRDPIEQKGLVGNEQNCRNVESLLYTHRVIGIWGMGGIGKSTIAKVLFAKLFHEFDHVCLVDNAKEYWLHKLFSALSKEKVSPANVDIIVQNHLNIYIEYGVQHDHSRLIVTTRDKHLLEGRVDRIYEVKEWQNPKPLELFCLEAFNRSSPIKGYESLSYRAVKYAGGVPLALKVLGSHFRGITSPEFWESTLRMLDNYPDQKIQRVLEVSYNGLHLLERNIFRDIAFFFKENEIDHVIRILDACGYEATSRIKVLADKALLTISKSRIIQMHDLLQQMGLEIVRQEDEDDPGKRSRLKDNEAREVIEENKGTDAIQGIALDLSQLKDSPLSLHADTFTKMKALRILKFYNTLGLISSNTYLNLPATLERFSDKLRYIEWIGYPFESLPSPFCAKFLVEIHMPRSKVKKLWQGMQELDNLEVIDLSQCQQFEELPDLSKAPRLKWVNLSCCESLRYLDPSALSSDMLVTLILDGCTKLESVTGEKHLKSLEKISVNGCSSLKEFAVSSDLIENLDLSNTGIQTLGPQIGRMHNLKWLNLEGLRLRHLLEELSCLKSLRELKLCDTWQVIDKERLSVLFNGLSNSLRKLHMKDMRNLFELPHNIYLLSKLQELRLDGSNVKRLPGSIINLQMLEILSLENCEKLLCLPWLPSRIQYVGAINCTSLESVSSLNSLVKVMLGTTKFITFKNSLKLDEHSWERIMESLQLTMMHAAFYNAINRYRYEHGYNYNSVALCLPGSRVPWQNKHGTPKSSITIELPKYSYSLGLVYWVVLSPAGGTKKHGAKIKCICHLPEGTMSEEWLSGYIGGLNSDHVYVFYDAYHCDNCLRYKQKVRFEFCVANDKGEVDGSICIKECGIRLIGVSDLPNVLEELDLEKGVELETGQRRTFTSMEEPSDEEESKPSDSILGTKSNSNSKMVQPDSAEEGTKSNSEMVEAYSAEEGTKSNSEMVEPDSAKEGIISYSKMIEPNSAEGNGKKNHYSDVEESINSTHKETKTDSGIDCNQNTRESINAVKYEGNKGRSIKPDATVASELDKENESKEKSRPKSAMDELESVEDNNGRKDYFYDVEENTGYTHEEIKIGAGSRESITEYTEDVKNKGNKRMPVERDASLHDLIIESQLKTEYYECEDKSITQSKLVGMIELESAKDNNGSKYFSGVEESIESACKATMTTARRGPEEKSTKSTKLVQVQSKGNDGMLVESNARLYEPVESQPDKENASEDNSKPKLMIVEGESPKDDANEDHFFDVSKRSMHKETKANARRGHKENTTQSTEIIIEDTFALEVVSEREDDTAEGGAQISQSKTENVDNEILSEPAAEKRPNVEAENQKQPIIELEDKELSSSSEEPKDPGQKELSDATSAPNNVPEKPLQEDPDQELSSSTSVKTKSNHPNSSTPECTPMNLDDCLNQVEENPFILLDFMSRELSISSKRSESSDQISSTKENFEAALEELRELAFSQPMTKNVKDVEYREKLEAAAQKLEKFPQELNEELNGKIKSFFDLYNQACEIVKEQEVTCDTITQVIAEKDAGFDKLQTAKNQVKQIEDAIGECKPKIEELEKRENDLNDKIRKLQEELSGVEKDKAKLETAQGKNIAKKTGFVASARHVSTNLGRLLKQKEELEKSQAKLDIGFEALEKRYNKMRGEPHF 1827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02624 1827 PRINTS Disease resistance protein signature 207 222 - -
Pumo4g02624 1827 PRINTS Disease resistance protein signature 344 358 - -
Pumo4g02624 1827 PRINTS Disease resistance protein signature 593 609 - -
Pumo4g02624 1827 SMART till_3 7 151 IPR000157 GO:0007165
Pumo4g02624 1827 MobiDBLite consensus disorder prediction 1554 1581 - -
Pumo4g02624 1827 SUPERFAMILY L domain-like 449 846 - -
Pumo4g02624 1827 MobiDBLite consensus disorder prediction 1361 1376 - -
Pumo4g02624 1827 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 682 IPR044974 GO:0006952
Pumo4g02624 1827 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 179 - -
Pumo4g02624 1827 Gene3D - 180 277 IPR027417 -
Pumo4g02624 1827 MobiDBLite consensus disorder prediction 1388 1447 - -
Pumo4g02624 1827 MobiDBLite consensus disorder prediction 1060 1238 - -
Pumo4g02624 1827 Pfam NB-ARC domain 265 384 IPR002182 GO:0043531
Pumo4g02624 1827 MobiDBLite consensus disorder prediction 1205 1238 - -
Pumo4g02624 1827 Pfam TIR domain 7 183 IPR000157 GO:0007165
Pumo4g02624 1827 MobiDBLite consensus disorder prediction 1067 1081 - -
Pumo4g02624 1827 Gene3D - 4 179 IPR035897 -
Pumo4g02624 1827 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 154 IPR035897 -
Pumo4g02624 1827 Gene3D Ribonuclease Inhibitor 460 687 IPR032675 -
Pumo4g02624 1827 Gene3D Ribonuclease Inhibitor 688 874 IPR032675 -
Pumo4g02624 1827 MobiDBLite consensus disorder prediction 1082 1122 - -
Pumo4g02624 1827 Coils Coil 1734 1768 - -
Pumo4g02624 1827 MobiDBLite consensus disorder prediction 1474 1488 - -
Pumo4g02624 1827 MobiDBLite consensus disorder prediction 1346 1583 - -
Pumo4g02624 1827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 404 IPR027417 -
Pumo4g02624 1827 Gene3D - 311 394 IPR042197 -
Pumo4g02624 1827 MobiDBLite consensus disorder prediction 1491 1532 - -
Pumo4g02624 1827 Coils Coil 1614 1634 - -
Pumo4g02624 1827 MobiDBLite consensus disorder prediction 1154 1175 - -
Pumo4g02624 1827 ProSiteProfiles TIR domain profile. 6 177 IPR000157 GO:0007165
Pumo4g02624 1827 Pfam Leucine Rich Repeat 574 591 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02624 Pumo-Chr4 46686807 46702744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02624 3 790 WRKY Transcription Factor Family AT4G12020 30.632 1.74e-82 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02624 - - vun:114165831 1295.8