Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02613 ATGGATGTTGGCTGCATTGCTATTGAATTTGCTAAATGTGCGGTTCCATATATTTGGAGTCAAATTGGTTACATATGCTCCTACAGGAAGAACCTTGAAAAGCTTGAAATCGAGGTTCAAAGGCTGGAGGTATACATGGAAAGTGTGAAACACTCTGTTGATGAGGCTGAAAGGAATGGAGGAAAAATTGAAGAAGAAGTACAAAATTGGCTAAAGAAAGCGAATGACATTGTTGTTGAGGCAAAGAAACTTATTGACACTGACACAGGATGTTGTTTGGGACATTGTCCCAATTTGTGGACAAAAAATCAGTTGAGTACAAAATTTGAAGAAATGACACCAGAGATTACGCAAGTCATAGCCAATGGAAAATTTGATAGAATTTCTTACCATGTTCCTTCTAAAGTCACATTTACTCCATTTTGTAGAGGTTACGAAGCATTGGAGTCCAGAACATCAATACTGAATCAGATTAAGGAAGCATTGAAGGATCCTAAAATCTACATGATTGGGGTGCATGGGATGGGTGGCGTGGGTAAAACAACTCTTGTGAATGAGTTAGCTTGGCAAGTAAGCAACGATGGCTCATTTGGTGTTGTGGTTATTGCCACTATAACCCCTTATCCAGATGTGGAAAAAATTCAATACAGAATTGCCGATGCGTTGAAACAAAAGCTTGAAGCGAAGACAAACGAAGGAAGAGCAGTTGAATTGCATGAAAGGATAAAACAGGAGAAGAGTGTTCTCATTATCCTAGATGACATTTGGAGTAGGAGTAAACTTGCTTTGACAGAAGTGGGAATTCCTTTTGGTGATGAACACAATGGTTGCAAATTAGTTATGACTTCTAGAGATCTTAATGTGCTGATAGAGATGACAACTCAAAAAGAATTTGATCTCAAAGCTTTACTGGAGGAGGATAGTTGGATTTTGTTCAAGAAAATGGCAGGTGATGTTTCTGAAGAATTCAACATAAAACCAATTGCAGAAGAAGTGGCCAAATGTTGTGCTGGTTTGCCCCTTTTGATCATTGTTGTGGCTAAGGGTTTGAGAAAAAAGGATGTCCGTGCTTGGAGGGTTGCCCTAAATCAACTAAAAGGATTTAAGCATAAAGAGTTGGAGAAAAATGTCTACCCTGCTTTGAAGTTAAGTTATGATTTTTTAGATACAAAGGAATTAAAGTCACTATTCTTAATCATTGGTTCATTTGGACTAAATGAGATACGCACTGAAGATTTATTTTTATGTTGTTGGGGGTTGAGCTTTTATAGGGACATGCACACATTGATGGAGGCAAGAGACACACATTACACATTAATAGATGAGCTTAGGGCCTCTTCACTGTTGCTTGAAGGTAAACCTGATTGGGTTCGAATACATGATGTTGTGCGTGACGTGGCTAAATCAATTGCATCTACGTCTCCTCCGACCGATCTAACCTATCCCACCTATGCTGATGAGCTTCGCAAGTGCTGTTATATTATCTTTCAGTCTTCTTTGACTGAAGTCCCAGCTGATAACTTTTTCTCTGGGATGAGAGAAGTGATGACTTTGAGTTTATATAGCATGTGGTTAACCCCTTCCCTACCTGCTTCTCTCTATCTGTTGAAAAACCTTCGCTCATTGAATCTAAATGGATGTAATTTAGGAGACATAAGGATGGTTGCAAAACTCCAGAAGTTAGAAATTCTTTCCTTGGAAAGATGTACAATTATAATGCTTCCAAAAGAAATAGGATATCTAACTCATCTACGTTTGCTAAATTTAACAGAATGCTCCCAACTACGAGTCATTCCAACAAATCTTATATCAAGTTTGACGTGTTTGGAAGAATTGTACATGGGGGGTTGCTATAATATTTACTGGGGGGTTCCTATTTTAAGTGAGTTGCATAATTTGCATAAGCTGACAACTCTGGAGATATCAATCAAAGATACTTCAGTTTTGTCAAAGGAATTGCAGTTCCCTGCAAAGCTCGAAAGATACAACATATTAATAGGCTATATGTGGAAATGGTCTTTTGAAGGGTATGGTGGAGCTCGTGGAACTTCAAGAACTCTTAAGCTCACAGAATCTTGGTGGACAAGCATATCATTGAGCATAGTTGACGACTTGAGCTTTGCTAACTTAAAGGGTGTTAAGAATTTGTTGTGTGAATTGGATGTGGAAGGTTTTACACAATTAAAGCATCTACATATCAATGGAAGTGGTGAATTGTTGCATATCATTAACTCAAAAGAGTTGGGGAATCATCATTTTGCATTCCCCAATTTGGAGACTTTGGTTCTTGAGAATCTACCTATGATGGAAGAAATATGCCATGGTCCAATTTCGGCACAATCTTTTGCAAAACTTAAAGTTATTAAACTTAAAAGTTGTTATAGATTGAAGAATGTACTTTTGTATTCCCTCACAAGAAGTCTTTCTCAACTTCACGAGATGGAAGTTTCTGGATGCGAAGGTATGATAGAGATCATAGCAATGGAAAGCCAAGAGAATGAGGAAGAACTTCCCAAGATTGTTCTCCCTGAATTACATTCTCTCACTTTACAAAAATTACCCATGCTTCAGAGTTTCTCTTTACCACGAACAGTCGATGAGGGTAATTCATCCGGTCAAAGCATTCCTCTAACACTATTTAATCAACAGGTTCAATTTCCAAACTTGGAGACACTGCATATCAGCACCATGAATGATTGGATGTCCATATGGCCTAATCAAGTGGCTCCAAATTCCTATAGTAAGTTGAAGAAAATTATCATTTTTGACTGTGAAAGCCAATATGTCTTTCCCATCTCTGTGGCTAAAGAGCTTCGGCAGCTCCAAGTTCTTGAAATAGGCGTGTGTAACATAAAGAATATTGTTGAAGAAAGTGATAGTACTTGTGATATGACACTTGTTTACCTTGAATTACGGAAGTGTCATGATATGATGACCATAGTCCCATCCTCTTTGCTATTTCGGTGTTTAGATGAATTGTTTGTGTCCAGGTGTCATGGACTGGTAAATATTATAATGCCATCATCAACCACAAGTTTACCAAATCTTCGCATTTTAAGCATATACAATTGTGATGAGCTAGAGGAAATTTACGGAAGCAGTAATGAGGGTGATGCACCACTGGCACTGGATGAGATTGCTTTTATGAAATTGGAGAAATTGGGATTCGATGAGTTACCGAAGCTCACAAGCTTTTGCCAGGGAAGTTACGACTTCAAGTTTCCATCACTACAAATGGTATATATAAGAGAATGTCCCCTAATGGAGACTTTCTGTCATGGAAACTTAACCACACCAAGCCCCATAAATGTGCAATATGGATGGAATGAAGATCATTGGTATGGAGACCTTAATACTACTATTAGAACAATTTTCACTAAACAGAATACAGAACAAGATTTGCATTCATCATCAGAATATGAAGACGACTGA 3432 0.38 MDVGCIAIEFAKCAVPYIWSQIGYICSYRKNLEKLEIEVQRLEVYMESVKHSVDEAERNGGKIEEEVQNWLKKANDIVVEAKKLIDTDTGCCLGHCPNLWTKNQLSTKFEEMTPEITQVIANGKFDRISYHVPSKVTFTPFCRGYEALESRTSILNQIKEALKDPKIYMIGVHGMGGVGKTTLVNELAWQVSNDGSFGVVVIATITPYPDVEKIQYRIADALKQKLEAKTNEGRAVELHERIKQEKSVLIILDDIWSRSKLALTEVGIPFGDEHNGCKLVMTSRDLNVLIEMTTQKEFDLKALLEEDSWILFKKMAGDVSEEFNIKPIAEEVAKCCAGLPLLIIVVAKGLRKKDVRAWRVALNQLKGFKHKELEKNVYPALKLSYDFLDTKELKSLFLIIGSFGLNEIRTEDLFLCCWGLSFYRDMHTLMEARDTHYTLIDELRASSLLLEGKPDWVRIHDVVRDVAKSIASTSPPTDLTYPTYADELRKCCYIIFQSSLTEVPADNFFSGMREVMTLSLYSMWLTPSLPASLYLLKNLRSLNLNGCNLGDIRMVAKLQKLEILSLERCTIIMLPKEIGYLTHLRLLNLTECSQLRVIPTNLISSLTCLEELYMGGCYNIYWGVPILSELHNLHKLTTLEISIKDTSVLSKELQFPAKLERYNILIGYMWKWSFEGYGGARGTSRTLKLTESWWTSISLSIVDDLSFANLKGVKNLLCELDVEGFTQLKHLHINGSGELLHIINSKELGNHHFAFPNLETLVLENLPMMEEICHGPISAQSFAKLKVIKLKSCYRLKNVLLYSLTRSLSQLHEMEVSGCEGMIEIIAMESQENEEELPKIVLPELHSLTLQKLPMLQSFSLPRTVDEGNSSGQSIPLTLFNQQVQFPNLETLHISTMNDWMSIWPNQVAPNSYSKLKKIIIFDCESQYVFPISVAKELRQLQVLEIGVCNIKNIVEESDSTCDMTLVYLELRKCHDMMTIVPSSLLFRCLDELFVSRCHGLVNIIMPSSTTSLPNLRILSIYNCDELEEIYGSSNEGDAPLALDEIAFMKLEKLGFDELPKLTSFCQGSYDFKFPSLQMVYIRECPLMETFCHGNLTTPSPINVQYGWNEDHWYGDLNTTIRTIFTKQNTEQDLHSSSEYEDD 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02613 1143 PRINTS Disease resistance protein signature 169 184 - -
Pumo4g02613 1143 PRINTS Disease resistance protein signature 579 595 - -
Pumo4g02613 1143 PRINTS Disease resistance protein signature 336 350 - -
Pumo4g02613 1143 PRINTS Disease resistance protein signature 242 256 - -
Pumo4g02613 1143 SUPERFAMILY L domain-like 456 1028 - -
Pumo4g02613 1143 Gene3D - 140 300 IPR027417 -
Pumo4g02613 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 399 IPR027417 -
Pumo4g02613 1143 Gene3D - 302 389 IPR042197 -
Pumo4g02613 1143 Gene3D Ribonuclease Inhibitor 835 1098 IPR032675 -
Pumo4g02613 1143 Gene3D Ribonuclease Inhibitor 486 620 IPR032675 -
Pumo4g02613 1143 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 966 1099 - -
Pumo4g02613 1143 Coils Coil 32 73 - -
Pumo4g02613 1143 ProSiteProfiles Leucine-rich repeat profile. 538 559 IPR001611 GO:0005515
Pumo4g02613 1143 Gene3D Ribonuclease Inhibitor 621 834 IPR032675 -
Pumo4g02613 1143 Pfam NB-ARC domain 154 386 IPR002182 GO:0043531
Pumo4g02613 1143 SMART AAA_5 166 304 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02613 Pumo-Chr4 46235981 46241506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02613 167 470 WRKY Transcription Factor Family AT5G45050 26.299 7.65e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02613 - - gmx:100805295 1259.97