Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02571 ATGCTATCTTCAAATGTTGTTCCATCATCATCCCCTGTCACTTTCTCCAAACCCAATCACCATTTCTTCATCAATGCAACTCCCAATCTCAAACCAAATCTTCTCATCAGAAGGTTTCAGGCCCAACACATACCCACTCCTCACCTTCATGAATCACCTCTCAAAAGTTCCAAACTTTCTTCTCAGATCCAACATTCAATCACAAAGTTAGGGTCTTTCAACAGATTCCTCTCACACCCTTTTGAGCTCGCATCAAAACCCAGATACCAAATCGTTAAAGCTGCATCTGAGGCCAATCCTGAAGGAGAAAATGTAGCCCCCAGTGACCCCAAACCTAAGAATCTCAAACTTGCTCTGGTGTTTGGGCTATGGTACTTCCAAAACATTGTGTTCAACATTTACAACAAGAAAGTGTTAAACATATTTTCTTTCCCATGGCTTCTTGCATCTTTTCAGCTCTTTGTTGGGTCCATTTGGATGCTGGTGCTGTGGTCCTTAAAGCTCCAACCTTGTCCAAAAATCTCAAAACCCTTCATCATTGCTCTCCTTGGACCTGCTTTGTTCCACACAATAGGCCACATATCAGCCTGTGTTTCATTCTCCAAGGTTGCTGTTTCCTTCACACATGTCATCAAATCTGCTGAACCAGTTTTCTCTGTCATTTTTTCTTCTGTCCTTGGTGATAGGTACCCCATTCAGGTTTGGCTCTCAATTCTGCCCATTGTGCTTGGTTGCTCTTTAGCTGCTGTTACTGAGGTGTCCTTCAATGTACAAGGATTGTGGGGTGCCCTTATTAGCAATGTTGGTTTTGTGTTGAGGAACATCTACTCTAAAAGAAGTTTACAGAGTTTCAAGGAAGTTGATGGCTTGAACTTGTATGGATGTATTACTATAGTTTCATTGCTTTACCTGTTTCCAGTGGCTATTTTTGTAGAAGGGTCTCAGTGGATCCCAGGGTATTACAAGGCAATTGAAGCTATAGGCAAAACATCCACATTTTATACCTGGGTGTTGGTGTCTGGGGTGTTCTACCATCTTTATAACCAATCATCTTACCAAGCACTTGATGAGATTAGCCCATTGACTTTCTCTGTGGGAAACACAATGAAAAGAGTGGTGGTGATTGTGTCTTCAGTTTTGGTGTTCAGGAATCCGGTTCGACCTCTTAATGCCCTTGGATCTGCCATTGCAATTCTTGGGACTTTCCTGTATTCTCAGGCAACATCCAAAAAGAAAGCAAAGAAAATTGAAGGGGAAAAGAGTAGTTAG 1269 0.42 MLSSNVVPSSSPVTFSKPNHHFFINATPNLKPNLLIRRFQAQHIPTPHLHESPLKSSKLSSQIQHSITKLGSFNRFLSHPFELASKPRYQIVKAASEANPEGENVAPSDPKPKNLKLALVFGLWYFQNIVFNIYNKKVLNIFSFPWLLASFQLFVGSIWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSVLGDRYPIQVWLSILPIVLGCSLAAVTEVSFNVQGLWGALISNVGFVLRNIYSKRSLQSFKEVDGLNLYGCITIVSLLYLFPVAIFVEGSQWIPGYYKAIEAIGKTSTFYTWVLVSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPVRPLNALGSAIAILGTFLYSQATSKKKAKKIEGEKSS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02571 422 PANTHER SOLUTE CARRIER FAMILY 35 116 410 - -
Pumo4g02571 422 Pfam Triose-phosphate Transporter family 115 405 IPR004853 -
Pumo4g02571 422 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 115 415 IPR004696 GO:0016020|GO:0022857|GO:0055085
Pumo4g02571 422 SUPERFAMILY Multidrug resistance efflux transporter EmrE 300 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02571 Pumo-Chr4 44818568 44820338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02571 24 420 Antiporters AT5G17630 70.290 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02571 K15283 - gmx:100101869 721.079