Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02533 ATGGTGGTTATAAAAAGGATGAAGGATTGGACTATTTCCAACCATGACTTCAAGCAAAGAATGCAAATACTGAGTCAAGCAAAGCACTCTCATGCTAAACTGTCACAAATAGCATTGCTTTCAAGTGCAGAGATAGTTCCTGAGCCACTTGGTCTTGTTCTCATAATCTCATCATGGAACTTTCCCTTTGGACTTCCCTTTGCAATAGCTGCAGTGGATCGAATATTTGGAATTACAGCTACATGTAACTCTCTTCCTCGTTAA 264 0.3977 MVVIKRMKDWTISNHDFKQRMQILSQAKHSHAKLSQIALLSSAEIVPEPLGLVLIISSWNFPFGLPFAIAAVDRIFGITATCNSLPR 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02533 87 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 68 IPR016162 GO:0016491
Pumo4g02533 87 SUPERFAMILY ALDH-like 42 68 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02533 Pumo-Chr4 43144106 43145865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02533 1 85 Aldehyde Dehydrogenase Gene Family AT4G34240 35.294 1.07e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02533 K00128 - aip:107647086 68.1662