Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo4g02505 | ATGGGGAGCAGAAAGGAAGATGAGAGGAACGAGAAAATTATCAGAGGTCTCATGAAGCTTCCGCCGAATCGAAGATGTATCAACTGCAACAGCTTGGGACCACAATATGTATGTACGAGTTTTTGGACTTTCATTTGTATGACATGCAGTGGAATACATCGTGAGTTTACTCATCGTGTGAAGTCTGTGTCAATGGCAAAGTTCACTTCACAAGAAGTTGATGCTCTTCAAAATGGAGGTAACCAGCGTGCAAGGGAAATATATTTGAAAAATTGGGACTTCCAGAGGCAGCGATTGCCAGATAACAGCGATGTTGATAAAATAAGGGAATTTATAAGGAGTGTATATGTGGATGGAAGATATGCTGGAGTGAAGTCTTCAGAAAAGCCTCCAAGAGATGCGCAGAGCCCTGGAATTCATGAAGACGAGATTAGGCGGGCCAGTTCTTATCATTCATATTCTCAAAGTCCTCCATATGATTATCAATATGAAGATCGACGGTATGGAAAACAGGCAGCTGCACTGACCAGGAAGCCTGGTTCAGATAAAGCTCGCTATGAAGGGAAGATGTCTAGTATTATCTACAGTCCTGGCCGCTTCAGTGATCATGCATATGATGACAGATTTGCAAATGAGGGATCTGGTCCAAGAATTTCTGACTTTTCTGTGTCTAGTGGTGGCGAACAATTCAAATCCGATGTTCAGTCTCCAAATTTTCACAAAGATATCAAGACTACCAGCAGTCCATCCTATCAGCGGCGTTCTGGTTCCAGTTCAAGTGAAGATGTGTGGTCCCAAGCAAGAAATGCATCTCTGGAAACTAATGCCAATGCCAAGAGAGATGCAGATAGAATTCGTCCTCTGCAGAGAACTGCGTCAGCACAATCAACAGACAACAAACTTTCATCCTTGAGATCTTATAATTCTGGCAGTTTAGTTAATTTTTTCTCAGAATCAGTCCAACCTTCAGAACCACTTCAGAATAAAGCATTTGGCATTCCACGACCACCTGGTCCTACAAGATCTGTTAGCATGGACTTTTCCAAGGCACCATTGGAATCAGCTTCATCTGTTGATCTTTTTCAGTTTCAGTTACCAGCAGCACCATCTCAAGCTCCAACAGTGGATCTGTTTCAATCATCTGTTTCATCTGCAGCTCCAACAGTGGATCTATTTCAATCATCTGTTTCATCTGCAGCTCCATCTTTCAATGAGAATCAACTTACTCAAACATCTCAGATTGCATCTATTGACTTTTTTGCCGATTTTTCTCAGCAGCCTTCTACTGTAACCTCAGATGAGAAGGCACTGGAGTTATCTGTCCCTAAAAATGAAGGATGGGCAACTTTTGATATGCCTCAGAGCACCTCCTCTACTGCACAAGTGGAAATTCCAGCCACTGTACCCTCAAGTGCTAAATCTTTACAAGAAACATTTGATCCATTTTCAACCTCAAATGCAAACACGCAATGGCCATCTTTTGAAATTTCTAGTGTCAGTGTACCTTCTTCAGTTACATCTAATTTATGGCATGATGGTTTGTGGAATGGAGAAGAACAAGTTTCTGCTATGGCAGCAAACCCTCAACCATGGAATGCATTTGAAGATTCTGGTGGCCATCATCCGGTGAATGCCCTTAGTCAAGGATTACAATTGCACAATTTTCCATCAGCTGATAATCAAATTTTGGGTTTAAGAGAGTCCGAGGGATCCAATAAAGATGGAGTTAAAGGCATTGCCCCTGTTAGTGGGTTTGATAATCATGACATCCCATCACATGTCAGTGGCTCAGCGTATCCCCCACCCACGCTTCCTCCAATGGGAGATATTCAACCTAATGGAATGAAATCTAAATCAACTAATCCATTTGATTATCCCTTTGAATCTGATGTAGATCACAACAATATGTTTCTTGGTATGAACTCTTTGCAAGCTGCACTGCCAGATGCCCTGTTTCCAGCCACCTTCCATGGTGGTATAAGTGAATCTTGGCTTCCTCAAAACACGGTGGTTTGTCATTCATGGCTGTGCAATCACCAAGTTCTCAAATACAGAACATCCAGGCACCGGAACCAGTTGCTTCGTTTGGGGGAAATCCTTTTGCATAGGATTATGCTGTAG | 2121 | 0.4239 | MGSRKEDERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTSFWTFICMTCSGIHREFTHRVKSVSMAKFTSQEVDALQNGGNQRAREIYLKNWDFQRQRLPDNSDVDKIREFIRSVYVDGRYAGVKSSEKPPRDAQSPGIHEDEIRRASSYHSYSQSPPYDYQYEDRRYGKQAAALTRKPGSDKARYEGKMSSIIYSPGRFSDHAYDDRFANEGSGPRISDFSVSSGGEQFKSDVQSPNFHKDIKTTSSPSYQRRSGSSSSEDVWSQARNASLETNANAKRDADRIRPLQRTASAQSTDNKLSSLRSYNSGSLVNFFSESVQPSEPLQNKAFGIPRPPGPTRSVSMDFSKAPLESASSVDLFQFQLPAAPSQAPTVDLFQSSVSSAAPTVDLFQSSVSSAAPSFNENQLTQTSQIASIDFFADFSQQPSTVTSDEKALELSVPKNEGWATFDMPQSTSSTAQVEIPATVPSSAKSLQETFDPFSTSNANTQWPSFEISSVSVPSSVTSNLWHDGLWNGEEQVSAMAANPQPWNAFEDSGGHHPVNALSQGLQLHNFPSADNQILGLRESEGSNKDGVKGIAPVSGFDNHDIPSHVSGSAYPPPTLPPMGDIQPNGMKSKSTNPFDYPFESDVDHNNMFLGMNSLQAALPDALFPATFHGGISESWLPQNTVVCHSWLCNHQVLKYRTSRHRNQLLRLGEILLHRIML | 706 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo4g02505 | 706 | MobiDBLite | consensus disorder prediction | 134 | 148 | - | - | |
Pumo4g02505 | 706 | PRINTS | HIV Rev interacting protein signature | 23 | 42 | IPR001164 | GO:0005096 | |
Pumo4g02505 | 706 | PRINTS | HIV Rev interacting protein signature | 60 | 81 | IPR001164 | GO:0005096 | |
Pumo4g02505 | 706 | PRINTS | HIV Rev interacting protein signature | 42 | 59 | IPR001164 | GO:0005096 | |
Pumo4g02505 | 706 | Gene3D | Arf GTPase activating protein | 2 | 131 | IPR038508 | - | |
Pumo4g02505 | 706 | Pfam | Putative GTPase activating protein for Arf | 12 | 122 | IPR001164 | GO:0005096 | |
Pumo4g02505 | 706 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 9 | 122 | IPR037278 | - | |
Pumo4g02505 | 706 | MobiDBLite | consensus disorder prediction | 289 | 303 | - | - | |
Pumo4g02505 | 706 | CDD | ArfGap_AGFG | 11 | 121 | - | - | |
Pumo4g02505 | 706 | MobiDBLite | consensus disorder prediction | 123 | 161 | - | - | |
Pumo4g02505 | 706 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 11 | 129 | IPR001164 | GO:0005096 | |
Pumo4g02505 | 706 | MobiDBLite | consensus disorder prediction | 217 | 276 | - | - | |
Pumo4g02505 | 706 | SMART | arf_gap_3 | 11 | 129 | IPR001164 | GO:0005096 | |
Pumo4g02505 | 706 | FunFam | Arf-GAP domain and FG repeat-containing protein 1 | 1 | 134 | - | - | |
Pumo4g02505 | 706 | PANTHER | ARFGAP/RECO-RELATED | 1 | 673 | IPR044820 | GO:0005096 | |
Pumo4g02505 | 706 | MobiDBLite | consensus disorder prediction | 206 | 303 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo4g02505 | Pumo-Chr4 | 41469622 | 41477085 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo4g02505 | 14 | 137 | C2H2 Transcription Factor Family | AT3G07940 | 31.343 | 1.01e-11 | 64.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo4g02505 | K15044 | - | gmx:100788316 | 1125.54 |