Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02499 ATGACACAGAAGCAGAAGCATCCTCCTCCTCTCTCCATTGAGGATCCACCCACCTCTTCCTCTTCCGATGAAGATGAAGAGCAGCAACAACCTTCCTCCCAGCAACAACACATAGAAGAAGTTTCCTCTTCAGAAGAAGGTGAAGAATCTCCTTCCCAAGAAGAAGACAACCAACAACCTCCCACAAACCCCCACCCCAAACCCAAACCCAAACCCTCGTCCTCAGAATCCGACTCCAAGCCCACGGAACAGGCCCAAAAGCCCAAGCCCCAGCCCTCTCCAGAGTCGCCCAAATCAATACCCAAGCGCCCCGCCCAGAACAACGCACACGTCACTGACCCGAAACGTGCGAAGAAGAAACCACCCGGTGCTTCCTTTTCCTCCACCGCCACCGCCACCGCCGCCGTTGCTGCTTCCGACGACGCGACGGAGGAGGACCGGGAGAAGTCCGGCGGCGGCGGCGGCCAAACGAAGTTCTTCCAGAGGAGACTCTTTAGCGAGGAAGACGAACTCGCCATTCTGAAGGGCATCCCCGAGTTCATTTCAAGGACAGGGCAAGACCCTTACAAGTACATCGACGCCTTCCGCAATTTCGTTAAGAAGTCGCTCCGCGTGGAAGCTTCGAGCAGCCAGCTCAAGGAGAAGATCCGACGGCTGAAGAAGAAGTTTGAAACTAAAGCACGGAAGAAGGGGAGGAACGGGGAGGACCCTGTGTTCTCCAGATCTCACGACCGGACGGTGTTCGAGTTGTCGAAAAAGGCTTGGGGTGAAGGAGCCACTGGGCTGCTGGTGGAAATGCCCAAGCCTAATGGAAAAAGAAAAACTGCCAAGACTCTAAAGAAGGAAGCTGCTAGCAGGAATGTAGTGGCAAAATCCGAAACTAAAACGCTACCGGAGCCGATGGAGTTGGAGGATTCTGGGAAGCCTGATAGTGGTGATGTAAATGTAAATTTGCTTTACCGCCAAGTATCTGGTTTTAAAGAGCTGGATGAGGATGAGATGAAGAGGGGATTGGCATTAATTGGAGAATCAAACAGGAAAGAGTTGGAGGGCAAGTGGAAGAAACTGCAACTTGCTGAGATCGAACTCTTTGCGAATCGCTCACTACTTATTGGGGAGCAGATTAAGTTGATATTTGAAGCGCTTCAGTCATCCAACCATTAG 1164 0.5223 MTQKQKHPPPLSIEDPPTSSSSDEDEEQQQPSSQQQHIEEVSSSEEGEESPSQEEDNQQPPTNPHPKPKPKPSSSESDSKPTEQAQKPKPQPSPESPKSIPKRPAQNNAHVTDPKRAKKKPPGASFSSTATATAAVAASDDATEEDREKSGGGGGQTKFFQRRLFSEEDELAILKGIPEFISRTGQDPYKYIDAFRNFVKKSLRVEASSSQLKEKIRRLKKKFETKARKKGRNGEDPVFSRSHDRTVFELSKKAWGEGATGLLVEMPKPNGKRKTAKTLKKEAASRNVVAKSETKTLPEPMELEDSGKPDSGDVNVNLLYRQVSGFKELDEDEMKRGLALIGESNRKELEGKWKKLQLAEIELFANRSLLIGEQIKLIFEALQSSNH 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02499 387 PANTHER BNAANNG10740D PROTEIN-RELATED 24 381 IPR007592 GO:0006355
Pumo4g02499 387 MobiDBLite consensus disorder prediction 287 310 - -
Pumo4g02499 387 MobiDBLite consensus disorder prediction 1 161 - -
Pumo4g02499 387 Coils Coil 209 229 - -
Pumo4g02499 387 MobiDBLite consensus disorder prediction 23 40 - -
Pumo4g02499 387 Pfam Protein of unknown function, DUF573 162 256 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02499 Pumo-Chr4 40905134 40908814 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02499 13 381 GeBP Transcription Factor Family AT1G61730 27.228 3.82e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pumo4g02499 DUF573 3.8e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02499 - - gsj:114412342 376.326