Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02497 ATGAAGATCACTACCATCCTAACAATCTTCTTCCTCTTTGTCCTTCCGTTCACATTTGCTGACCTGCGCGTTGGTTTCTATACCACAACCTGTCCAAGAGCAGAGACAATTGTAGGTGAAGTTGTGCAAAGTCGTTTCAACCAGGATAAATCCATTGTTGCAGCCCTGCTTCGCTTGCACTTTCACGATTGCTTTGTTAGAGGCTGTGACGCCTCTATACTAATAGATCCAACCGACACCAGGACATCGGAGAAGAATGCAGGACCAAATCAAACGGTTCGTGGATTTGAGATCATTGATGAAGCCAAAACAATCTTAGAACAAGTGTGCCCATTAACAGTTTCTTGTGCAGATATCATAGCACTTGCCACAAGAGATGCAGTGGCACTGGCAGGAGGGATTAGGTACAGCGTCCCCACGGGAAGAAAAGATGGTCTATTAGCCGATCCTTCACTAGTCATCCTTCCAGCACCATCACTCTCTGTGGCAGGTGCTCTTCAGTTTTTCACCGAAAAAGGGTTGACACTAGAGGACATGGTTACCCTTTTGGGAGGACACACCGTTGGTTTTGCTCACTGCAGTTTCTTTCAAGAGAGGCTTTCAACTGTTCGAGGAAGAGTTGATCCCACAATGGACCCTCAATTGGATGCCAAGTTGGTGAAAATTTGTGACTTCAATAGGCCACCAATGAGTGACCCTCGTGTGTTTTTAGACCAAAACTCATCTTTTTTATTTGACAATCAATTTTACAACCAAATGAGGCTCAGGAGAGGGGTACTTCACCTTGATCAGCAATTGGCTTTGGACTCATTGTCAAGAGACATGGTAGAGAATTTTGCAGCAGATGATGGTACATTTCAGCAGAGATTTGCAAATGCCATGATCAAGCTGGGCAGCATTGGTGTTTTGGATGGAAATGATGGTGAGATTAGATGGAATTGCAGGGCTTTTAATCATCCTTTGTAG 966 0.4451 MKITTILTIFFLFVLPFTFADLRVGFYTTTCPRAETIVGEVVQSRFNQDKSIVAALLRLHFHDCFVRGCDASILIDPTDTRTSEKNAGPNQTVRGFEIIDEAKTILEQVCPLTVSCADIIALATRDAVALAGGIRYSVPTGRKDGLLADPSLVILPAPSLSVAGALQFFTEKGLTLEDMVTLLGGHTVGFAHCSFFQERLSTVRGRVDPTMDPQLDAKLVKICDFNRPPMSDPRVFLDQNSSFLFDNQFYNQMRLRRGVLHLDQQLALDSLSRDMVENFAADDGTFQQRFANAMIKLGSIGVLDGNDGEIRWNCRAFNHPL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02497 321 CDD secretory_peroxidase 22 317 IPR033905 GO:0004601|GO:0042744
Pumo4g02497 321 Gene3D - 25 318 - -
Pumo4g02497 321 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Pumo4g02497 321 PANTHER - 5 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 FunFam Peroxidase 156 297 - -
Pumo4g02497 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Pumo4g02497 321 Pfam Peroxidase 40 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 ProSiteProfiles Plant heme peroxidase family profile. 21 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 FunFam Peroxidase 25 163 - -
Pumo4g02497 321 SUPERFAMILY Heme-dependent peroxidases 21 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02497 321 Gene3D Peroxidase, domain 2 156 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02497 Pumo-Chr4 40671196 40672385 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02497 1 319 Peroxidase AT4G26010 53.750 6.25e-124 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02497 K00430 - gmx:100816459 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01355 8 45979595 45984084 Pumo4g02497 4 40671196 40672385 PCT