Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02492 ATGGTGACCATTTCGGGCGCACATACAGTTGGTGTGGCACACTGTGGCTCCTTTATAAGTAGACTCTCAAGTTTCAATGGCAAACCTGACCCTACAATGGACCCGGCGTTAGATGCTAAGTTGGTCAAGTTATGTAATAACTCTACAAAGAGTGATCAACCACCGCCACCAGCTGCATTTTTGGACCAAAAGACACCGTTTCTAGTTGATAATCAGTTCTACAAGCAGATTCTTGTGAAAAGAGGCATATTGCAGATTGATCAACAGCTTGCCTTGGATACATCTACAAGGGGTTTTGTGTCTGGCCTTCCATCAAATGATGTCAAGTTTCGGAACAAGTTTGCAAGTGCAATGATCAAAATGGGAATGATTGATGTTCTGGTTGGACATGCTGGGGAAATTCGAAAGAATTGCAGGGTCATCAATAAAGACAACTAG 438 0.4292 MVTISGAHTVGVAHCGSFISRLSSFNGKPDPTMDPALDAKLVKLCNNSTKSDQPPPPAAFLDQKTPFLVDNQFYKQILVKRGILQIDQQLALDTSTRGFVSGLPSNDVKFRNKFASAMIKMGMIDVLVGHAGEIRKNCRVINKDN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02492 145 Gene3D - 122 142 - -
Pumo4g02492 145 Gene3D Peroxidase, domain 2 1 121 - -
Pumo4g02492 145 ProSiteProfiles Plant heme peroxidase family profile. 1 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02492 145 Pfam Peroxidase 1 101 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02492 145 SUPERFAMILY Heme-dependent peroxidases 1 144 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo4g02492 145 FunFam Peroxidase 1 121 - -
Pumo4g02492 145 PANTHER - 1 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02492 Pumo-Chr4 40227897 40228334 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02492 2 142 Peroxidase AT5G17820 49.650 2.45e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02492 K00430 - cpap:110807807 177.178