Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02491 ATGCCAAATATGAGTACAAACAAGATATCATTCCTGCTGATTTGCTTGTTTGTGCTTCCCTTTGCATTTGCTGATCTGCAGGTTGGATTCTATAGATCTTCATGCCCACAAGCAGAGTCCATCATAAAGAATGCGGTGCACAAGCAATTCAACCGTGACAAGTCCATAACTGCAGCCTTGCTTCGCTTGCATTTCCATGATTGCTTTGTTAGAGGTTGTGATGCATCTATACTCATATATTCAACTAAGGATAATGAGGCAGAAAAAGTTTCAGATGCAAATCGAGGTGTTGTGGGATTTGATCTGATTGATGAGGTAAAGGAGACCCTTGAAGCTGCATGCCCTTCAACTGTGTCATGTGCAGATATCATAACACTTGCTACAAGAGATGTTGTGGCCTTATCTGGAGGACGAAAATATGATGCTCCCACAGGAAGACGTGATGGAATAGTTTCCAAAAGGGAAGAAAGCGATGAGAATTTGCCAGAAGCCAAGATTTCTGTAGCAGCTTCATCAAAACTTTTTGCTAGATAA 534 0.4139 MPNMSTNKISFLLICLFVLPFAFADLQVGFYRSSCPQAESIIKNAVHKQFNRDKSITAALLRLHFHDCFVRGCDASILIYSTKDNEAEKVSDANRGVVGFDLIDEVKETLEAACPSTVSCADIITLATRDVVALSGGRKYDAPTGRRDGIVSKREESDENLPEAKISVAASSKLFAR 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02491 177 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02491 177 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02491 177 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02491 177 ProSiteProfiles Plant heme peroxidase family profile. 25 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02491 177 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02491 177 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02491 177 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02491 177 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02491 177 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02491 177 SUPERFAMILY Heme-dependent peroxidases 25 176 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo4g02491 177 Pfam Peroxidase 43 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02491 177 PANTHER PEROXIDASE 25-RELATED 14 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02491 177 Gene3D - 29 161 - -
Pumo4g02491 177 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Pumo4g02491 177 FunFam Peroxidase 29 174 - -
Pumo4g02491 177 Gene3D Peroxidase, domain 2 162 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02491 Pumo-Chr4 40225114 40226641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02491 4 176 Peroxidase AT3G03670 56.069 3.32e-64 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02491 K00430 - gmx:100777946 224.557