Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02486 ATGTCAGCCCCGTCACCATCACCGTCACCAGTGCCATTCTCCGCCACGCCACCACCCCAACTCTCTTCCCCTGCACCTCATAGTTCAACTTCACCATCACCATCACCATCACCAAATCAGTCCCTACCTCTGGCTACTCCTCCACCGGCACCACCACCTCTAGTGTCACCACCACCACCGCTGTCACCACAATCCCCGGCATCAATTTCTTCTCCTCCAGCAGCCCCCCCACCTCCTCAGAGTTCTTCTCCTTCTCCAGCATCTACTACACCTGTAAGTAGTAGTGCAGCTCCTCCTCCTCCTCCTACTAGGAAAAGTCCTTTTGATTCTCATTCTACTCCATCACACACTTCTGGATTGGCTCCTCCACCACCTCCATCAGCAAAAAGTTCTGGCCCAGGAAGCCGTGGTGGCAGTACTAGTGCAGTGGCTGTTGTTGGTCTAGTGACAGGAATTCTACTGCTTGGCTTCATTGGCATTGCTATCTGGTACCTGAGGAGGCAAAAGAAAAGGGTTTCTAAGAGTGGTGCTTATGACTTGCCATCTCCTCTTGGCTCATCACCTGAATCAGATTTGTCCTTACATAAGATTCGTTCTTCAGCTCCTCTCATACAAAGAGCATCCGGCGGTAATAATACACCATCAGGACTAGGCAACTCAAGGTCATTCTTTGCATATGAAGAGCTAATGAAGGCCACAAACGATTTTTCAACTCAAAATCTTTTGGGTGAGGGAGGATTTGGTTGTGTGTATAAAGGATCCCTTCTAGATGGGAGAGAGGTAGCAGTTAAGCAACTGAGGATTGAAGGAAGTCAGGGTGGGAGAGAATTCAAAGCTGAAGTGGAAATTATTAGCCGCATACATCATCGTCATTTGGTTTCCTTAGTGGGATACTGCATTTCAGATAACAGAAGACTGCTTGTCTATGACTATGTCCCCAACAATACCCTTTATTTTCATCTTCATGGGGAAGGTAGGCCAGTGCTGGACTGGACAAACCGCGTTAAAATTGCGGCTGGAGCAGCCAGAGGAATAGCTTATCTCCATGAAGACTGCAATCCTCGGATTATTCACAGGGATATCAAGTCAGCAAACATTCTTTTAGACTACAACTTTGAAGCTCGAGTCTCAGATTTTGGGCTAGCCAAATTAGCAGTTGAAGCAAATACACATGTAACAACACGTGTTGTGGGAACTTTTGGATATGTTGCTCCTGAATATGTATCAAGTGGTAAATTCACTGAGAAATCGGATGTATACTCTTTTGGAGTCATGCTTTTGGAGCTCATTACTGGAAGGAAGCCAGTAGATATATCTCAACCAGTTGGAGAAGAGAGTCTAGTTGAATGGGCTCGACCTTTGCTAAATAATGCACTTGATAATGAGGAATTTGAGAGTTTGATAGATCCAAAGCTAGGAAAGAACTATATTGAAAATGAAATGATTTGCATGGTTGAAGTTGCTGCTGCTTGCGTGCGATATTCATCTGCCAAAAGACCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGTTTAGCTTCCTGTGATCTTTCAAATGGAATGAGAGTTGGGGACTCTACACAGCAATCTGCAGAAATAAGATTATTACGAAGGATGGCATTTGGTAGTCAAGATTATAACTCAGACTTTTTAAGCCACATAAGTTTGAATACGTAA 1677 0.4484 MSAPSPSPSPVPFSATPPPQLSSPAPHSSTSPSPSPSPNQSLPLATPPPAPPPLVSPPPPLSPQSPASISSPPAAPPPPQSSSPSPASTTPVSSSAAPPPPPTRKSPFDSHSTPSHTSGLAPPPPPSAKSSGPGSRGGSTSAVAVVGLVTGILLLGFIGIAIWYLRRQKKRVSKSGAYDLPSPLGSSPESDLSLHKIRSSAPLIQRASGGNNTPSGLGNSRSFFAYEELMKATNDFSTQNLLGEGGFGCVYKGSLLDGREVAVKQLRIEGSQGGREFKAEVEIISRIHHRHLVSLVGYCISDNRRLLVYDYVPNNTLYFHLHGEGRPVLDWTNRVKIAAGAARGIAYLHEDCNPRIIHRDIKSANILLDYNFEARVSDFGLAKLAVEANTHVTTRVVGTFGYVAPEYVSSGKFTEKSDVYSFGVMLLELITGRKPVDISQPVGEESLVEWARPLLNNALDNEEFESLIDPKLGKNYIENEMICMVEVAAACVRYSSAKRPRMGQVVRAFDSLASCDLSNGMRVGDSTQQSAEIRLLRRMAFGSQDYNSDFLSHISLNT 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02486 558 Pfam Protein tyrosine and serine/threonine kinase 238 508 IPR001245 GO:0004672|GO:0006468
Pumo4g02486 558 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 156 539 IPR047117 -
Pumo4g02486 558 Gene3D Transferase(Phosphotransferase) domain 1 312 528 - -
Pumo4g02486 558 SUPERFAMILY Protein kinase-like (PK-like) 217 507 IPR011009 -
Pumo4g02486 558 FunFam proline-rich receptor-like protein kinase PERK8 312 523 - -
Pumo4g02486 558 SMART serkin_6 236 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02486 558 CDD STKc_IRAK 242 512 - -
Pumo4g02486 558 FunFam Proline-rich receptor-like protein kinase PERK8 209 311 - -
Pumo4g02486 558 ProSiteProfiles Protein kinase domain profile. 236 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02486 558 MobiDBLite consensus disorder prediction 93 107 - -
Pumo4g02486 558 MobiDBLite consensus disorder prediction 1 140 - -
Pumo4g02486 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 356 368 IPR008271 GO:0004672|GO:0006468
Pumo4g02486 558 MobiDBLite consensus disorder prediction 1 85 - -
Pumo4g02486 558 Gene3D Phosphorylase Kinase; domain 1 206 311 - -
Pumo4g02486 558 ProSitePatterns Protein kinases ATP-binding region signature. 242 264 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02486 Pumo-Chr4 40099907 40104884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02486 130 551 Trihelix Transcription Factor Family AT5G38560 62.785 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pumo4g02486 PK_Tyr_Ser-Thr 9.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02486 - - gmx:100799296 740.725