Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02482 ATGGCTATTGCCAAGGCATCAAGGCAAAGTGTCCTCCTGCAGATATCTGAAGGTGCTGCACAACTCACTGTGTACAAAGGGAGCTCGCAGCAGGCATTTGCTCTGATTATTGATGGAAAATCACTTGTTTATGCATTAGAAGATAATATGAAGAACATGTTTCTGGAGCTAGCAATTCGTTGTGCATCTGTTATTTGCTGTCGCTCATCACCAAAGCAGAAAGCACTGGTCACTAGATTGGTCAAATCTGGAACTGGGAAAACAATATTAGCTATTGGTGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGGTTGGTATAAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCACAATTCCGGTATTTGGAACGATTACTTCTGGTGCATGGACATTGGTGTTACCGGAGGATCTCATCTATGATATGCTATTTTTTCTACAAGAATATCACATTTGGTTTTACTCTATTCTTATATGAGGTGTATGCATCATTCTCTGGACAACCTGCATACGATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTTTCGTCACTTCCTGTGATTGCACTTGGGGTGTTTGATCAGGATGTATCTGCTCGGTACTGCTTGAAGTTTCCTTTGTTATATCAAGAAGGAGTACAGAATGTCCTTTTCAGCTGGCGTCGAATACTCAGCTGGATGCTTAATGGATTTATCAGTGCCTTAATAATTTTCTTTTTCTGCACAAAAGCAATGGAGCTCCAGGCCTTCGATGTGGAGGGGAGAACTGCTGGAAAGGATATACTGGGAGCAACAATGTATACTTGTGTAGTTTGGGTTGTAAACTTGCAAATGGCACTAGCTATAAGTTACTTCACCATGATCCAACATTTTTTCATCTGGGGTTCCATTGTTTTCTGGTATCTTTTTCTCCTGATATATGGATCAATGCCTCCACACTTTTCTACAAATGCTTACAAAGTCTTCATTGAAGCTCTTGCTCCTTCCCCTTCCTATTGGATTGTGACATTCTTTGTGGTTATTTCAACCCTTATACCATACTTCTCATACGCAGCAATTCAGATGCGGTTCTTTCCCATGCATCATGAAATAGTGCAATGGATAAGATATGAAGGGAAGATTAAGGATCCTGAGTTTTGTGATATGGTGCGGCAGAGATCGTTGCGGCCAACAACTGTGGGTTCAACAGCACGCTTAGCTGCTAAGGCTCACCACGTTAGAGACAAATGTTAA 1266 0.4123 MAIAKASRQSVLLQISEGAAQLTVYKGSSQQAFALIIDGKSLVYALEDNMKNMFLELAIRCASVICCRSSPKQKALVTRLVKSGTGKTILAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYDDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILSWMLNGFISALIIFFFCTKAMELQAFDVEGRTAGKDILGATMYTCVVWVVNLQMALAISYFTMIQHFFIWGSIVFWYLFLLIYGSMPPHFSTNAYKVFIEALAPSPSYWIVTFFVVISTLIPYFSYAAIQMRFFPMHHEIVQWIRYEGKIKDPEFCDMVRQRSLRPTTVGSTARLAAKAHHVRDKC 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02482 421 Gene3D - 3 132 IPR023214 -
Pumo4g02482 421 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 26 381 - -
Pumo4g02482 421 NCBIfam HAD-IC family P-type ATPase 63 175 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo4g02482 421 NCBIfam phospholipid-translocating P-type ATPase 22 377 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pumo4g02482 421 SUPERFAMILY HAD-like 52 147 IPR036412 -
Pumo4g02482 421 SUPERFAMILY Calcium ATPase, transmembrane domain M 141 370 IPR023298 -
Pumo4g02482 421 Pfam Phospholipid-translocating P-type ATPase C-terminal 120 370 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02482 Pumo-Chr4 40027665 40030500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02482 3 416 Primary Pumps ATPases AT3G25610 76.812 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02482 K01530 - gmx:100781421 807.364