Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02481 ATGGTGAAAGAAGGAATCGAAGACTGGCGTCGGAAAAAACAGGATATTTTGGTGAACAATAGAAGAGTTAAAGTGCATAAAGCTGATGGTGTCTTTGAATATACTGCATGGAAGAATCTGAGGGTGGGGAATATAGTGAAGGTAGAGAAGGATGAGTTCTTCCCAGCTGACCTCTTGTTGCTTTCATCCAGTTATGAGGATGCAGTTTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATTTAAAGTTAAAACAAGGGTTAGAGGTAACTTCTTCCTTACAGGAGGATCTCAACTTCCTAAATTTTAAAGCTACAGTCAAATGTGAAGACCCGAATGCAAATTTGTACTCATTTGTTGGGAGCATGGAGTTTGAAGAGCAAAATTATGCCCTTTCTCCTCAGCAACTTCTTCTCCGAGACTCTAAACTTCGTAATACAGACTACATTTTTGGAGCTGTCATTTTCACTGGTCATGACACTAAGGTTATTCAAAATTCTACTGACCCACCTTCAAAAAGAAGCAGAATTGAGAAGAAGATGGACAGAGTCATCTATTTCTTGTTTTGTATTTTATTTCTAATGGCATCTGTTGGATCGATTTTCTTTGGCATTGCAACTAAAGATGACTTTCAAAATGGGTTGATGAAAAGATGGTATTTACGACCAGATGATTCAACTATTTTCTTTGATCCGAATAGATCAGCTGCTGCTGCTTTATTTCATTGTTTGACAGCCTTAATGTTGTATGGGTTCTTTATTCCCATCTCTTTGTATGTGTCAATAGAAATTGTCAAAGTCCTTCAGAGCATTTTCATCAATCAAGATATCCATATGTACTACAAGGAAGCAGACAAACCAGCCCGAGCTCGTACTTCAAACTTGAATGAGGAGCTTGGCCAAGTTGATACAATACTTTCTGATAAGACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTATTGCCGGGGTAGCTTATGGCCGGGGTGCTACAGAGGTTGAGAAGGCCATGAATAGAAGAAAAGGTTCTCCATCAATTCATGAGCATGATATTGAATCAGAAGCAGATAACATTAGGGGTTCACTAGATAAAAAAGCACTCATTAAAGGTTTTAACTTTGCTGATGAAAGAATAATAAATGGAAAATGGGTTAATGAGCCTCATGCAGATGTTATCCAGAAGTTTTTTCGCCTATTGGCAGTCTGTCATACAGCCATTCCAGAAGTGGATGAAGACACAGGAAATGTCTCATATGAGGCTGAATCCCCAGATGAAGCAGCATTTGTGATTGCATCAAGAGAACTTGGTTTTGAATTCTACAAAAGGGGTCAGACTAGTTTATCGACTTATGAGTTGGATCCAGTTTCTGACAAGAAAATTGAAAGGAAATATAAGCTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGGAAGATGAAGAAGGGAAAATTTTGCTTTTCTGCAAAGGTGCAGACAGCATCATGTTTGAAAGACTTGCCAAGAATGGGAGGGAGTTTGAAGAGAAAACCATGGAGCATGTGCATGAGTATGCTGATGCAGGTCTGAGAACCCTTATACTTGCCTATCGTGAACTTGATGCAGAAGAATACAAGGAGTTTGATAATAAATTCTCTAAGGCCAAGAATTTAGTCAGTGCTGATCAGGAAATACTGATTGAGGAAGTATCAGATAAGATTGAGAAGAACCTAATTCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAGATGCGGTTCCTGATTGCATTGACAAGCTTGCCCAAGCCGGAATTAAAATTTGGGTTTTAACTGGGGATAAAATGGAGACTGCAATCAATATTGGTTTTGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTATAATTCATTTGGCATAG 1935 0.3897 MVKEGIEDWRRKKQDILVNNRRVKVHKADGVFEYTAWKNLRVGNIVKVEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSSLQEDLNFLNFKATVKCEDPNANLYSFVGSMEFEEQNYALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIEKKMDRVIYFLFCILFLMASVGSIFFGIATKDDFQNGLMKRWYLRPDDSTIFFDPNRSAAAALFHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYKEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGATEVEKAMNRRKGSPSIHEHDIESEADNIRGSLDKKALIKGFNFADERIINGKWVNEPHADVIQKFFRLLAVCHTAIPEVDEDTGNVSYEAESPDEAAFVIASRELGFEFYKRGQTSLSTYELDPVSDKKIERKYKLLNVLEFNSSRKRMSVIVEDEEGKILLFCKGADSIMFERLAKNGREFEEKTMEHVHEYADAGLRTLILAYRELDAEEYKEFDNKFSKAKNLVSADQEILIEEVSDKIEKNLILLGATAVEDKLQDAVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLA 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02481 644 Gene3D - 588 642 IPR023214 -
Pumo4g02481 644 Gene3D - 315 587 IPR023299 GO:0000166
Pumo4g02481 644 FunFam Phospholipid-transporting ATPase 426 584 - -
Pumo4g02481 644 ProSitePatterns E1-E2 ATPases phosphorylation site. 309 315 IPR018303 -
Pumo4g02481 644 SUPERFAMILY Calcium ATPase, transduction domain A 23 166 IPR008250 -
Pumo4g02481 644 Gene3D - 7 169 - -
Pumo4g02481 644 FunFam Phospholipid-transporting ATPase 1 169 - -
Pumo4g02481 644 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 393 IPR023298 -
Pumo4g02481 644 Pfam Cation transport ATPase (P-type) 417 510 - -
Pumo4g02481 644 NCBIfam phospholipid-translocating P-type ATPase 1 642 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pumo4g02481 644 SUPERFAMILY HAD-like 295 633 IPR036412 -
Pumo4g02481 644 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 641 - -
Pumo4g02481 644 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 314 586 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02481 Pumo-Chr4 40024038 40027627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02481 1 643 Primary Pumps ATPases AT1G68710 76.161 0.0 1035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02481 K01530 - gmx:100792960 1211.44