Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02444 ATGGGTAGTAGTGACATGGACAAAACCCCGAAAGAGAAGGAGTCTAAGACACCTCCAGCTACGTCACAGGAGCAGTCGTCAACAACTGGCATGGCAACAGTTAATCCTGACTGGTCTAACTTTCAGACATATTCTCCTATACCTCCACATGGGTTCTTGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGCGTCCAGCCTATTATGCCTCCCTATGGCACTCCACCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCCATTCCTCCGGGATCTTATCCTTTCAGCCCTTTTGCCATGGCTTCTCCAAATGGTATTGCAGATGCTTCGGGAAATACCCCAGGCAGCATCGAAGTTGGTGGTAAACCTCCTGAGGTGAAGGAAAAATTACCAATCAAAAGATCAAAAGGAGGAAGTGTTAGTGGGGGTAATTTGAATATGTGGATTACAGGAAAAAATAATGAACCTGGTAAAGCACCAGGAGAATCTGCTAATGGGATTCATTCCAAAAGTGGTGAGAGCGCAAGTGATGGAACTAGTGAAGGAAGTGATGAGAATTCCCAGAATGACTCTCAATTGAAATCTGGGGAGAGGCAGGACTCTTTTGAAGATGAACCATCTCAAAATGGCAGTTCAGTACATGCTCCTCAAAATGGGGTACATAATAGACCTCAGACAGTTGTTAACCAAACTATGTCTATCATGCCTATACCTACTGCAAGTGCTCCTGGAGCAGTTCCTGGTCCCACAACTAATTTAAATATAGGAATGGATTATTGGGGGACGCCAACTTCATCCACCATTCCTGCAATGCATGGAAAAGTTCCTTCTACTGCAGTTGCTGGAGGGATGATTACTGCTGGGTCACGAGATGGTGTTCAGTCACAACATTGGCTACAGGACGAAAGAGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCACGTAGATCCAGGATGCGGAAGCAGGCCGAATGTGATGAACTAGGTCAGCGTGCTGAAGCTTTGAAAGAAGAAAATGCCACTCTCCGATCAGAAGTGAGCCGGATCAGGAGTGAGTATGAGCAACTACTTTCTGAGAATGCTTCCCTCAAGGAGAGACTTGGGGAGATACCTGGTGTTGCGACGCCTGGGAACGAGGATCTTAGGTCTGGCCAGAATGATCAGCATGTGAGTAATGACACTCAACAGAGTGGTCAGACAGAGGTTGTGCAGGGTGTTCATTAG 1257 0.467 MGSSDMDKTPKEKESKTPPATSQEQSSTTGMATVNPDWSNFQTYSPIPPHGFLASSPQAHPYMWGVQPIMPPYGTPPHPYVAMYPHGGIYAHPSIPPGSYPFSPFAMASPNGIADASGNTPGSIEVGGKPPEVKEKLPIKRSKGGSVSGGNLNMWITGKNNEPGKAPGESANGIHSKSGESASDGTSEGSDENSQNDSQLKSGERQDSFEDEPSQNGSSVHAPQNGVHNRPQTVVNQTMSIMPIPTASAPGAVPGPTTNLNIGMDYWGTPTSSTIPAMHGKVPSTAVAGGMITAGSRDGVQSQHWLQDERELKRQRRKQSNRESARRSRMRKQAECDELGQRAEALKEENATLRSEVSRIRSEYEQLLSENASLKERLGEIPGVATPGNEDLRSGQNDQHVSNDTQQSGQTEVVQGVH 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02444 418 Gene3D - 312 366 - -
Pumo4g02444 418 MobiDBLite consensus disorder prediction 1 42 - -
Pumo4g02444 418 SUPERFAMILY Leucine zipper domain 312 368 IPR046347 GO:0003700|GO:0006355
Pumo4g02444 418 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 316 331 IPR004827 GO:0003700|GO:0006355
Pumo4g02444 418 CDD bZIP_plant_GBF1 314 364 IPR045314 GO:0003700|GO:0006355
Pumo4g02444 418 MobiDBLite consensus disorder prediction 390 418 - -
Pumo4g02444 418 MobiDBLite consensus disorder prediction 212 230 - -
Pumo4g02444 418 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 409 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pumo4g02444 418 MobiDBLite consensus disorder prediction 297 336 - -
Pumo4g02444 418 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Pumo4g02444 418 Pfam bZIP transcription factor 309 371 IPR004827 GO:0003700|GO:0006355
Pumo4g02444 418 MobiDBLite consensus disorder prediction 117 230 - -
Pumo4g02444 418 FunFam BZIP transcription factor 311 362 - -
Pumo4g02444 418 MobiDBLite consensus disorder prediction 303 318 - -
Pumo4g02444 418 Coils Coil 329 377 - -
Pumo4g02444 418 MobiDBLite consensus disorder prediction 371 418 - -
Pumo4g02444 418 MobiDBLite consensus disorder prediction 174 202 - -
Pumo4g02444 418 MobiDBLite consensus disorder prediction 1 18 - -
Pumo4g02444 418 Pfam Disordered region downstream of MFMR 135 276 - -
Pumo4g02444 418 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 311 374 IPR004827 GO:0003700|GO:0006355
Pumo4g02444 418 SMART brlzneu 309 373 IPR004827 GO:0003700|GO:0006355
Pumo4g02444 418 MobiDBLite consensus disorder prediction 19 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02444 Pumo-Chr4 38710461 38717726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02444 1 412 bZIP Transcription Factor Family AT2G35530 61.190 5.53e-158 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo4g02444 MFMR_assoc 2.3e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02444 K09060 - gmx:100101912 794.653