Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02440 ATGGATGGGGTCGCACGTGCGGAGCAGGCTCAGTCCTCGGGCTCGGGCTTGGCCTCGGGGTGGCGTCCCCGCGGGTTCGCGTTCTCTCCTTGTAAGCCTAAGGCTGAAGAAGAAGCTGCTGCTGCTGCTGTTGCTGAGAAGCCGCAACCCTTGCGCGTGGTTGTGAGGAAACCCTTGGTGGCTAGATTGACCAAGGAAATAGTTGAAACATACCAAATATGCAATCCACAGTTTAAATATTCTGAAGATCTAAAACCAAAAAGATTTTTGACCAGCCCATCTGTTGGAGTGCTTAATGATGGCTATGATAATGTAAACTCAGATCTTATTTTGACAGTGAATTTTGTCTTGATCCGTTTAGAGAAAAATAAAAGATATATTGTCAAAGATCTCCTTGGCCATGGGACATTTGGACAAGTGGCTAAATGCTGGGATTCAGATACCAACAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCTGCATACTATCAACAGGCGCTGGTTGAAGTAACTATTTTAACAACGTTAAATAAGAAGTATGATCCTGAGGATAAGCATCACATTGTCCGTATATATGATTATTTTGTATATCAACGACATTTGTGCATTTGCTTTGAATTGCTGGACACAAACTTGTATGAGCTTATCAAGATGAATCATTTTAGGGGATTATCACTTGGTATTGTTCAGCTATTCTCTAAGCAGATTTTATGCGGACTGGCTCTACTAAAAGAGGCTGGCATTATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTACGAGCACTGTGAAGCCAGCAGAAATAAAAATCATTGACTTTGGATCAGCATGCATGGAAAACCGCACCGTTTACTCTTATATTCAGAGTCGATACTATAGATCACCTGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCGGAATTGTTTCTTGGATTACCATTATTCCCTGGGGCTTCAGAATTTGATCTTTTAAAACGGATGATTGAAATACTTGGAGGACAACCACCTGATTATGTACTAAGGGATGCCAAAAACACAAGTAAATTCTTTAAGTGTATCGGGAGTCTCCAGAACATAGAGAGCAGTGAGAGTTCCAAAAATGGAAGTGTTTATCAAGCATTGACAGTAGAAGAATATGAAGCTAGAGAATTGAAGAAGCCATCAATTGGAAAAGAGTATTTTAATCATATGAACCTTGAAGCAATTGTTACAAACTATCCCTACAGAAAAAACCTTCCTAAAGAAGATATTGTCAAAGAAAGTCAAATACGACTAGCTCTCATTGATTTTTTGAAAGGGCTTGTTGAATTCGATCCTGCAAAACGCTGGTCACCCTTTCAGGCTTCAAAACACCCTTTTGTAACTGGGGAACCTTTTACACACCCTTACAAGCCTCCTCCTGAGACTCCTCATATGCCAGTACTTCAAAATATCAAGGTGGATAATCATCCAGGAGGAGGACACTGGTTTGCCGCTGGTCTATCACCTAATGTTCCAGGCAAAAGCAGAGCTTCCCTCTATAGCAGTCCACATTTTCAGATGGTTCAACATCCGCCTGCTAATAGTTATGGCAGTGTAGGAAGTCATGGGAGCTATAATGACAGTGTTGGGCTTGGAAGCAGCTATGGAAGTTACGGAGAGAGCAGTAACATGTTTGCTTACTATTCACCTATTGGTCCATCTGGTATGAACATGCACAATCAGGGAAGTATGTCAATCCTTGGGAATAGTCCGGATGCTAGGAGGAGAGTTAAGTACCAACCTGGGAATGGGCTGGGCATAAGTCCATCAGCTGGAAATTTTGCTCCTCTTCCCCTTGGTGCCAGCCCATCTCAATTTACTCCACCAAGTACCTATAGTCAGGTTTCAGTCGGTTCTCCAGGACACTATGGACCTACATCTCCTGCAAGAGGAACTTCTCACGGATCACCTTTAGGCAAGACGGCTGCAGTTAGCCAGTTTAATAGAAGAAAAAATTGGGGACATTCTGGAAGTCCTCAAACTCAAGAAACATTTTCTTCACATTGGCAAGGCCAATATCCTGACAGCACAAGCCATACTGAGGGAACATCACAAGCTCTTGGCAGTTCACCATCATATCTACAGTCAAATAGTAATCCTGGAAACTGGAAGCAGCGAGGAAGTGGAGGGTTATCTGCTAATCAGAACATTTCATCCTTGATGAAGCCCAGTGCTCATATGAACTCACAATCAACAGAATTGGTTCATGACAATGCGGAGACAGGCATTTCATTGCCTGATCCTGGTGATTGGGACCCTAATTATAGTGATGAATTACTTCTTCAAGAGGATGGTTCAGATGAAAGCTGTTTGACAACTGAGTTTGGCAGAAGTATGAATCTTGGTTCTACTGAAACATGGGCTGGATTTGGAAGGTTCAACCATGTTTCCAGCTCAAACACTCCAATAATCATGCAAAGAGTAAATGGACCAAGTCAAGCATTCACTAATGTTGAGATGGGTAGCCTACCAACTCATGATCTTCAAGCAGCATATGTACCATCGATGTCTAAGCATTTTCATCTCATGCCTCATATTTTACAAAACTCTCCAAGCCGTTTTGGACACCAATCTGTTCAAAGATTCACACATGGTAGGCCCCCCCAGGGTGCTGAGTGGAATCAAATTAAGATTCAGGCTCCTTCTGGTTTCAGCAGTGTGGGCCCTCGTTCTCCCAGGAATAACTCATTCACCGACAGTATGACATGGGGGCGAAGAATGAATCCTTCTGTCTCAAGCATGCCTCCAACATCCCGCACAAGAAAAGATTATGCAAGGATAGACTAG 2850 0.4253 MDGVARAEQAQSSGSGLASGWRPRGFAFSPCKPKAEEEAAAAAVAEKPQPLRVVVRKPLVARLTKEIVETYQICNPQFKYSEDLKPKRFLTSPSVGVLNDGYDNVNSDLILTVNFVLIRLEKNKRYIVKDLLGHGTFGQVAKCWDSDTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLGIVQLFSKQILCGLALLKEAGIIHCDLKPENILLCTSTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLKRMIEILGGQPPDYVLRDAKNTSKFFKCIGSLQNIESSESSKNGSVYQALTVEEYEARELKKPSIGKEYFNHMNLEAIVTNYPYRKNLPKEDIVKESQIRLALIDFLKGLVEFDPAKRWSPFQASKHPFVTGEPFTHPYKPPPETPHMPVLQNIKVDNHPGGGHWFAAGLSPNVPGKSRASLYSSPHFQMVQHPPANSYGSVGSHGSYNDSVGLGSSYGSYGESSNMFAYYSPIGPSGMNMHNQGSMSILGNSPDARRRVKYQPGNGLGISPSAGNFAPLPLGASPSQFTPPSTYSQVSVGSPGHYGPTSPARGTSHGSPLGKTAAVSQFNRRKNWGHSGSPQTQETFSSHWQGQYPDSTSHTEGTSQALGSSPSYLQSNSNPGNWKQRGSGGLSANQNISSLMKPSAHMNSQSTELVHDNAETGISLPDPGDWDPNYSDELLLQEDGSDESCLTTEFGRSMNLGSTETWAGFGRFNHVSSSNTPIIMQRVNGPSQAFTNVEMGSLPTHDLQAAYVPSMSKHFHLMPHILQNSPSRFGHQSVQRFTHGRPPQGAEWNQIKIQAPSGFSSVGPRSPRNNSFTDSMTWGRRMNPSVSSMPPTSRTRKDYARID 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02440 949 MobiDBLite consensus disorder prediction 625 642 - -
Pumo4g02440 949 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 89 205 - -
Pumo4g02440 949 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Pumo4g02440 949 Gene3D Transferase(Phosphotransferase) domain 1 207 469 - -
Pumo4g02440 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Pumo4g02440 949 Pfam Protein kinase domain 127 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02440 949 PANTHER DUAL SPECIFICITY PROTEIN KINASE 57 471 - -
Pumo4g02440 949 SMART serkin_6 126 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02440 949 MobiDBLite consensus disorder prediction 903 940 - -
Pumo4g02440 949 MobiDBLite consensus disorder prediction 1 21 - -
Pumo4g02440 949 CDD PKc_YAK1 126 468 - -
Pumo4g02440 949 MobiDBLite consensus disorder prediction 617 737 - -
Pumo4g02440 949 SUPERFAMILY Protein kinase-like (PK-like) 121 490 IPR011009 -
Pumo4g02440 949 ProSiteProfiles Protein kinase domain profile. 126 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02440 949 MobiDBLite consensus disorder prediction 650 737 - -
Pumo4g02440 949 MobiDBLite consensus disorder prediction 903 949 - -
Pumo4g02440 949 Gene3D Phosphorylase Kinase; domain 1 91 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02440 Pumo-Chr4 38563894 38597281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02440 125 355 MAP Kinase Gene Family AT3G18040 33.740 2.13e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Pumo4g02440 Pkinase 8.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02440 K18670 - gmx:100792777 1829.68