Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02423 ATGTTTACGTGCATAGCGTGTACGAAGACTGATGAGAAGGATGAAGAAGGAGAAGCTCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACCACGCAGATAAAGGACATGGCACTGAAGTTTTCAGGTGCATACAAGCAATGCAAACCCTGCACAGGGTCCAGTAGTAGCTATAAGAAAGGACATAGACCATATCCAGATTTTGACACCATCTCAGAAGGGGTTCCATACCCTTACATTGGAGGAGGTGCAAGCTCAAGTTCAACCCCTGCATGGGACTTCACAACCTCTCACTACCCTGGTGGAAGATCTGACCCAAGATTTGCTGGGGCATTTGGTGGTGACCGCACCCCCAGAGGACGTGACTCAACATCAGTTTGTGATGTAGTCTTAGAGGATGAGGATGAGCCTAAGGAGTGGATGGCACAGGTGGAGCCAGGGGTTCACATTACCTTTGTCTCTCTTCCTAATGGAGGAAATGATCTTAAGAGAATTCGCTTCAGCCGAGAGATGTTTAATAAATGGCAAGCTCAAAGGTGGTGGGGTGAGAATTACGACAGAATCATGGAACTTTATAACGTCCAGAGATTTAATAAACAAGCTCTCAACACTCCTCCAAGGTCTGAGGATGAGCCAAGAGATTCTTCATACTCAAGATTGACATCTGCAAGGGAAAGCCCCATGGCCTCAAACAAGGATTGGACACCAAAAAGTCACTATAAGCCCTCTGGGAGCAGAGGATATTACCCGTCTGAACCAGACGGCGGTGGAGGCGGTGGCCACTACCATGCAGGGCCTTCAATGGAACCAGCAAGGGATACCACTGCTTCTAGAGATGAGCCTTCTATCAGCAATGCCAGTGAAATGGAGACAGAATGGGTAGAACAAGACGAGCCTGGAGTTTACATTACAATCAGGCAGCTAGCTGATGGAACAAGGGAACTTAGGCGTGTCAGATTCGGCCGGGAAAGATTTGGGGAGGTGAATGCAAAAACATGGTGGGAAGAGAACAGAGAGAGAATACAAGCTCAATACCTTTGA 1053 0.4805 MFTCIACTKTDEKDEEGEARESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSSYKKGHRPYPDFDTISEGVPYPYIGGGASSSSTPAWDFTTSHYPGGRSDPRFAGAFGGDRTPRGRDSTSVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNKQALNTPPRSEDEPRDSSYSRLTSARESPMASNKDWTPKSHYKPSGSRGYYPSEPDGGGGGGHYHAGPSMEPARDTTASRDEPSISNASEMETEWVEQDEPGVYITIRQLADGTRELRRVRFGRERFGEVNAKTWWEENRERIQAQYL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02423 350 ProSiteProfiles BRX domain profile. 295 350 IPR013591 -
Pumo4g02423 350 Pfam Transcription factor BRX N-terminal domain 21 55 IPR027988 -
Pumo4g02423 350 MobiDBLite consensus disorder prediction 205 297 - -
Pumo4g02423 350 MobiDBLite consensus disorder prediction 10 30 - -
Pumo4g02423 350 ProSiteProfiles BRX domain profile. 142 197 IPR013591 -
Pumo4g02423 350 MobiDBLite consensus disorder prediction 223 242 - -
Pumo4g02423 350 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 350 IPR044532 -
Pumo4g02423 350 Pfam Transcription factor regulating root and shoot growth via Pin3 294 349 IPR013591 -
Pumo4g02423 350 Pfam Transcription factor regulating root and shoot growth via Pin3 142 196 IPR013591 -
Pumo4g02423 350 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02423 Pumo-Chr4 38068098 38074972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02423 1 350 Major Intrinsic Protein MIP AT1G31880 69.014 7.17e-171 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02423 - - gmx:100785003 682.945