Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02422 ATGACAAGTGTCGAGTACCATACATTTATCAAGTTGTTTCATCTTGCAGATATGTGGGCAATGGGTGCTATTATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTACCAGTGAAGCAGATCAGATCTACAAAATATGTAGTGTGATAGGTAGTCCAACCACTGAATCTTGGGCAGATGGACTCAAACTTGCCAGGGATATCAAATATCAGTTTCCACAGCTTGCTAGTGTACATCTCTCTACACTGATCCCATCCAGAAGCGATGATGCAATCAGCCTTGTTACATCACTTTGTTCATGGGATCCCTGCAAGAGACCAACAGCAACAGAGGCTCTTCAACATCCTTTCTTTCAGAGTTGCTTTTACATCCCTCCATCCCTTCGCACCAGAGCTATAACCAGAACTCCTCCATCGGTTGCAGCTGGGACCAGGGGATCACTGGATCGGCAGGGGCTCAAGAGATATTCTGGTGCTTTGCCTAATACTAAAGTCACCAACAATTTTACTTCCCCGAAATTACAAGCTTCTATAGCTTCAGGTGTGCAACGGAAGCTGGATATGGCAAATGAGGATGGAATTAAGAACAAGAAGTCATTGAGGACTACTCAATCAAAATATCGATTACCAGGAAAAGACAGCCCAACTTCTATAAACAAGGGGAGGACTGCACGTGGGGTTTCAGAAACCGCTGAGAAGTTGGCAAATATGTCGATCGGTACTCGAAGACAGTCCTTGGGACAAACCCGACCACCTCCAATGAAGGCTGGAGTCAATTGGATTTCTGAATCTGGAAACTTCATGCTCAGGTCCGGACAACAAGTTCCAACTGAAAGAACTTTGACAAGAAAAGTTGCCGGGTGA 867 0.4544 MTSVEYHTFIKLFHLADMWAMGAIMAELFTLRPLFPGTSEADQIYKICSVIGSPTTESWADGLKLARDIKYQFPQLASVHLSTLIPSRSDDAISLVTSLCSWDPCKRPTATEALQHPFFQSCFYIPPSLRTRAITRTPPSVAAGTRGSLDRQGLKRYSGALPNTKVTNNFTSPKLQASIASGVQRKLDMANEDGIKNKKSLRTTQSKYRLPGKDSPTSINKGRTARGVSETAEKLANMSIGTRRQSLGQTRPPPMKAGVNWISESGNFMLRSGQQVPTERTLTRKVAG 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02422 288 MobiDBLite consensus disorder prediction 191 229 - -
Pumo4g02422 288 Gene3D Transferase(Phosphotransferase) domain 1 5 125 - -
Pumo4g02422 288 MobiDBLite consensus disorder prediction 204 225 - -
Pumo4g02422 288 Pfam Protein kinase domain 16 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02422 288 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 182 - -
Pumo4g02422 288 SUPERFAMILY Protein kinase-like (PK-like) 16 123 IPR011009 -
Pumo4g02422 288 ProSiteProfiles Protein kinase domain profile. 1 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02422 Pumo-Chr4 38061573 38064822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02422 16 122 Core Cell Cycle Gene Families AT3G48750 36.449 4.01e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Pumo4g02422 Pkinase 4.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02422 K08829 - gmx:100784474 514.998