Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02364 ATGCCAGAAAACTGCATAGCACCCAAACCAGAACACAACAACAACACTCACCCTGAGGAAGGACCACCTGATCAGATGACTGAGACTGTCCTTCCCATACAAACAAATGAGCAATCTTTTCCAAAACTGGCTATGTACCCCATAACTTTGAAGTTTGAGGAATTGGTGTACAAGGTTAAAATAGAGCAGAAGGGTATGTGTTGGGGGAGCACAAAGAGTTCTTCTAGAGAAAAGACCATATTGAAAGGAGTCACAGGCATGGTTTGTCCAGGAGAAATAATGGCTATGTTGGGGCCAAGTGGAAGTGGCAAAACCACACTTCTCACAGCCCTTGGAGGAAGGCTTAGTGGCAAACTATCTGGAAAGGTCACATACAACAACCAGCCCTTTTCAGGTGCCATGAAAAGAAGAACAGGCTTTGTGGCACAGGATGATGTGCTATACCCTCACCTCACTGTCACTGAAACCCTTCTCTTCACTGCACTTCTGAGGCTCCCCAACAGCTTGACCAAGGAAGAGAAAGTTCAGCATGTTGAGGGTGTTATCAGTGAGCTAGGACTGAACAAGTGCAGGGGTAGCATGATTGGAGGACCATTTTTCAGAGGGATATCAGGAGGGGAGAGAAAGAGGGTCAGCATAGGCCAGGAAATGCTCATCAATCCAAGCCTGTTGCTGCTTGATGAACCTACCTCAGGGTTGGACTCTACAACAGCACTAAGGATCCTAACCACAATCAAAAGATTGGCCAGTGGGGGCAGAACTGTTGTCACTACCATTCATCAACCCTCTAGTCGCCTCTATCACATGTTTGATAAAGTGGTCTTGCTCTCTGAAGGATGCCCCATCTATTATGGCCCTGCTTCATCTGCAGTGGACTACTTTTCTTCTGTTGGTTTTTCCACATCCATGATTGTCAATCCTGCTGATCTAATGCTTGACCTTGCCAATGGGATTGCTCCGGATATCTCCAAGCATGCAACTGAACAAAGTGAGAGCCAGGAGGCAGAAAATAAGTTGGTGAGGGAAGCTTTAGTCTCTGCTTATGACAAGAACATAGCTACTAGGCTGAAAGAAGAGCTATGTAGCTTGGAGGTGAATAACTACAAAGTCAATAAGGATGCTTCCACAAGAAATCACATGAAACCGGAGCAATGGAGCACAAGTTGGTGGCATCAGTTCAAAGTGCTGTTGCAAAGGGGGCTGAGGGAGAGAAGGTTTGAAGCGTTCAACAGGCTGAGAATATTCCAAGTCATAAGTGTCGCTTTCCTTGGTGGACTCCTGTGGTGGCACACCCCAGAATCACATATTGGAGATCGGATAGCCCTGCTCTTTTTCTTCTCTGTTTTCTGGGGATTCTACCCTCTCTATAATGCTGTTTTCACATTCCCACAAGAGAGAAGAATGCTGATCAAGGAACGTTCATCAGGAATGTACCGTCTTTCCTCCTACTTTCTAGCTAGAACAGTAGGAGACTTGCCAATAGAGCTTGCACTTCCAACTGCATTTGTCATCATAATCTATTGGATGGGAGGGCTCAAGCCTCATCCAGTGACCTTTCTCCTCTCCCTCCTAGTGGTCCTTTACAGTGTCCTTGTCTCTCAAAGCCTTGGCCTAGCATTTGGTGCCATTTTGATGGAGGTCAAACAGGCCACAACTTTGGCTTCTGTGACAACCCTTGTGTTTCTCATTGCTGGAGGCTACTATATACAACAGATTCCACCCTTCATAGAGTGGCTCAAGTACTTGAGCTATAGCTACTACTGTTACAAGCTTCTTCTTGGTGTGCAGTACAATGATGATGATCATTATGAGTGCTCAAAGGGGGTCTTGTGCAAAGTTGGAGAGTTTCCTCCAATTAAATCTGTGGGTTTGAATCACTTGTGGGTTGATGTGTCTATTATGGCCATGATGTTGGTAGGTTACAGACTAGTTGCTTATTTGGCACTGCAGAGAGTGAGGTAG 1962 0.4577 MPENCIAPKPEHNNNTHPEEGPPDQMTETVLPIQTNEQSFPKLAMYPITLKFEELVYKVKIEQKGMCWGSTKSSSREKTILKGVTGMVCPGEIMAMLGPSGSGKTTLLTALGGRLSGKLSGKVTYNNQPFSGAMKRRTGFVAQDDVLYPHLTVTETLLFTALLRLPNSLTKEEKVQHVEGVISELGLNKCRGSMIGGPFFRGISGGERKRVSIGQEMLINPSLLLLDEPTSGLDSTTALRILTTIKRLASGGRTVVTTIHQPSSRLYHMFDKVVLLSEGCPIYYGPASSAVDYFSSVGFSTSMIVNPADLMLDLANGIAPDISKHATEQSESQEAENKLVREALVSAYDKNIATRLKEELCSLEVNNYKVNKDASTRNHMKPEQWSTSWWHQFKVLLQRGLRERRFEAFNRLRIFQVISVAFLGGLLWWHTPESHIGDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTVGDLPIELALPTAFVIIIYWMGGLKPHPVTFLLSLLVVLYSVLVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIEWLKYLSYSYYCYKLLLGVQYNDDDHYECSKGVLCKVGEFPPIKSVGLNHLWVDVSIMAMMLVGYRLVAYLALQRVR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02364 653 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 50 303 IPR003439 GO:0005524
Pumo4g02364 653 Pfam ABC-2 type transporter 260 327 IPR043926 GO:0140359
Pumo4g02364 653 ProSitePatterns ABC transporters family signature. 203 217 IPR017871 GO:0005524|GO:0016887
Pumo4g02364 653 CDD ABCG_EPDR 47 285 - -
Pumo4g02364 653 MobiDBLite consensus disorder prediction 1 27 - -
Pumo4g02364 653 Pfam ABC transporter 81 231 IPR003439 GO:0005524
Pumo4g02364 653 Gene3D - 69 297 IPR027417 -
Pumo4g02364 653 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 25 646 - -
Pumo4g02364 653 SMART AAA_5 90 280 IPR003593 GO:0016887
Pumo4g02364 653 FunFam ABC transporter G family member 22 68 297 - -
Pumo4g02364 653 Pfam ABC-2 type transporter 392 597 IPR013525 GO:0016020|GO:0140359
Pumo4g02364 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 296 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02364 Pumo-Chr4 36103333 36107496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02364 80 279 Calmodulin-binding Proteins AT2G36910 28.846 9.31e-12 66.6