Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02354 ATGTCTTCTTCTGGGTATGCTACAAGGAGTGCTTTGTTTTTTCTGTTTCTGGCTGTGCTTGCTGCAAAAGTTAGCTTTTGCTTTTCCACCAAGGTTTATGTAGTGTACATGGGAAGCAAAAGTGGAGAACACCCAGATGATATTTTGAAGCAAAATCATCAATTGCTTGCTTCTGTTCACAGTGGAAGCATTGAACAAGCCCAAGCTTCTCATGTTTATACCTACAAACATGCATTCAGAGGCTTTGCAGCCAAACTCAGTGATGAACAGGCCTCCCAAATTTCTAAAATGCCAGGGGTGGTCTCTGTTTTTCCCAATTCTAAAAGAAAGCTGCACACAACTCATTCATGGGATTTCATGGGACTTCTTGATGACCAAACCATGGAGACTCTTGGTTACTCCATCAGAAACCAAGAAAATATCATCATTGGTTTCATTGATACTGGAATTTGGCCAGAATCCTCAAGCTTCAGTGACACCGACATGCCTGCAGTGCCACCAGGGTGGAAGGGCCAATGTCAATCAGGGGAGGCATTCAATGCCTCATCTTGCAACAGGAAAGTGATAGGAGCCAGATACTACAGGAATGGATATGAAGCTGAGGGAGAGTCAGATGCAAAAATGTCCTTCAGATCTGCAAGGGACAGCACTGGCCATGGGAGCCACACAGCCTCCATAGCAGCAGGGAGGTTTGTGGCAAACATGAACTACAAGGGGCTGGCAGGTGGAGGAGCAAGGGGAGGTGCACCAATGGCCAGAGTTGCTGTGTACAAGACATGTTGGGATTCTGGTTGTTATGATGTGGACTTGCTAGCTGCCTTTGATGATGCCATAAGAGATGGGGTTCACATTTTGTCCCTTTCTCTGGGTGCTGAATCACCCCAGGGAGACTATTTCAGTGATGCCATCTCTGTGGGGTCATTCCATGCGGCTAGGCGTGGGGTGCTGGTTGTTGCATCAGCTGGAAATGAAGGGAGTGCTGCCTCTGCCACTAACCTTGCTCCATGGATCCTCACTGTTGCTGCCAGCTCAACTGATAGGGATTTCACTTCTGATATCATATTTGGAAATGGTGCCAAAATCATGGGTGAAAGTCTCAGTCTCTTTGAAATGAATGCCTCCACAAGGATAATTTCTGCTTCTACAGCCAATGGAGGATACTTTACTCCTTATCAATCCAGTTACTGTTTGGAGAGTTCTCTGAACAAAACAAAGAGCAAAGGTAAGGTTCTGGTGTGTAGACATGCAGAGAGTTCAACAGAGTCCAAGGTGCAAAAGAGCAAGATAGTGAAAGCTGCAGGTGGAGTTGGCATGATACTTATTGATGAGATAGATCAAGATGTTGCCATCCCATTTGTGATCCCTTCAGCTATTGTTGGAAAGAAAACAGGAGAACAGATTCTATCTTATCTCAAAGCTACACGGAAGCCAGTATCAAGGATTTTTGGAGCAAAGACAGTTCTAGGAGCTCATCCTGCGCCGCGTGTAGCAGCATTTTCTTCTAAAGGCCCCAATGCTTTAAACCCAGAAATTCTGAAGCCTGATGTCACAGCTCCAGGACTAAATATCCTTGCAGCATGGTCTCCAGCAGCTGGAAACATGTTCAACATTCTCTCAGGAACTTCTATGGCTTGTCCTCATGTAACTGGAATTGCAACCTTGGTCAAAGCTGTTCACCCTTCATGGTCTCCATCTGCAATCAAATCTGCCATCATGACCACTGCTACAATTCTGGATAAGCACCACAGACCCATCATTGCAGATCCAGAACAAAGAAGGGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCTGCAAGAGTTCTTGATCCAGGTCTCATCTATGACTCAAAGCCAGCAGATTTTGTTGCATTCCTGTGTTCAATTGGTTATGATCAGCACTCACTCCATCAAGTTACAAGAGACAACAGCACCTGTGATAGGGCATTCAGCACAGCATCTGACCTCAACTACCCATCTATTGCAGTGCCCAATCTTAAAGACAACTTTTCAGTTGCTAGGATTGTGACCAATGTTGGCAAAGCAAGAAGTGTTTATAAAGCTGTAGTGTCTTCTCCCCCTGGTGTTAGAGTCAGTGTTATACCTAACCGGTTAATCTTCACAAGAATTGGACAGAAAATCAATTTCACTGTGAATTTCAAAGTAACTGCTCCCTCAAAGGGATATGCATTTGGGTTCTTGTCATGGAGGAATAGAAGATCACAAGTCACTAGTCCTTTGGTTGTCCGGGTTGCACCTGGAAAAAATGGGTTGGTCAGATAG 2286 0.4493 MSSSGYATRSALFFLFLAVLAAKVSFCFSTKVYVVYMGSKSGEHPDDILKQNHQLLASVHSGSIEQAQASHVYTYKHAFRGFAAKLSDEQASQISKMPGVVSVFPNSKRKLHTTHSWDFMGLLDDQTMETLGYSIRNQENIIIGFIDTGIWPESSSFSDTDMPAVPPGWKGQCQSGEAFNASSCNRKVIGARYYRNGYEAEGESDAKMSFRSARDSTGHGSHTASIAAGRFVANMNYKGLAGGGARGGAPMARVAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAESPQGDYFSDAISVGSFHAARRGVLVVASAGNEGSAASATNLAPWILTVAASSTDRDFTSDIIFGNGAKIMGESLSLFEMNASTRIISASTANGGYFTPYQSSYCLESSLNKTKSKGKVLVCRHAESSTESKVQKSKIVKAAGGVGMILIDEIDQDVAIPFVIPSAIVGKKTGEQILSYLKATRKPVSRIFGAKTVLGAHPAPRVAAFSSKGPNALNPEILKPDVTAPGLNILAAWSPAAGNMFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKHHRPIIADPEQRRANAFDYGSGFVNPARVLDPGLIYDSKPADFVAFLCSIGYDQHSLHQVTRDNSTCDRAFSTASDLNYPSIAVPNLKDNFSVARIVTNVGKARSVYKAVVSSPPGVRVSVIPNRLIFTRIGQKINFTVNFKVTAPSKGYAFGFLSWRNRRSQVTSPLVVRVAPGKNGLVR 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02354 761 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Pumo4g02354 761 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Pumo4g02354 761 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Pumo4g02354 761 Gene3D - 627 753 - -
Pumo4g02354 761 Gene3D - 346 488 - -
Pumo4g02354 761 Pfam Subtilase family 139 578 IPR000209 GO:0006508|GO:0008236
Pumo4g02354 761 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Pumo4g02354 761 ProSiteProfiles Serine proteases, subtilase domain profile. 116 610 - -
Pumo4g02354 761 Gene3D Peptidase S8/S53 domain 140 623 IPR036852 GO:0004252|GO:0006508
Pumo4g02354 761 CDD Peptidases_S8_3 110 576 IPR034197 -
Pumo4g02354 761 FunFam Subtilisin-like protease SBT1.5 627 753 - -
Pumo4g02354 761 Pfam PA domain 396 467 IPR003137 -
Pumo4g02354 761 SUPERFAMILY Subtilisin-like 111 614 IPR036852 GO:0004252|GO:0006508
Pumo4g02354 761 CDD PA_subtilisin_like 352 481 - -
Pumo4g02354 761 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Pumo4g02354 761 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 750 IPR045051 -
Pumo4g02354 761 Pfam Fibronectin type-III domain 656 750 IPR041469 -
Pumo4g02354 761 FunFam Subtilisin-like protease SBT1.5 140 356 - -
Pumo4g02354 761 FunFam Subtilisin-like protease SBT5.3 22 112 - -
Pumo4g02354 761 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 112 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02354 Pumo-Chr4 35916123 35922086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02354 30 751 Subtilisin-like Serine Gene Family AT1G32960 41.589 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02354 - - gmx:100808547 1413.28