Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02337 ATGTTCACGGCCAATTGCATGATCTGCTCTTCCTCCTCCGAGATGCCGGGTTCCCCTCCCGAGATCGCATCTTTGTCTTCAACGGGGATTACGTGGATCGAGGAGCTTGGGGCCTTGAAACCTTCTTGCTCTTGTTGGCTTGGAAGGTATTCATGCCACATAACATATATTTGCTACGAGGGAATCATGAATCAAAATACTGTACATCAGGTTTATGGTTTTGAGAAAGAAGTAATGGTAAAGTATGGTGATAAAGGTAAGCATGTGTACCGGAAATGTTTGGGGTGCTTTGAAGGTCTTCCTTTGGCTTCTATTATAGCAGGGTGTGTATACACAGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGACGCCGTCAAAGAGGTTAAAAGGAAAGAAGAACCGTAAGATTAATGTTAATCATGAGAGCAAAATTCTATCTCTTGGTTCCCTGGAAGAATTGTCTAAGGCTCGACGATCAGTTCTGGATCCTCCTTGGGAAGGCCCAAACTTGATTCCCGGTGATGTTTTGTGGTCCGATCCATCAAAAACTCCTGGTCTTGCTCCAAACAAAGAAAGAGGCATTGGCTTGATGTGGGGTCCTGATTGTACTGAAGAATTTTTGAAGAAGTACCAACTAAAGTTGATCATCAGGTCACATGAAGGTCCCGATGCCAGGGAAAAAAGGGATGGTTTTGGAGGAATGGATGAAGGTTACACTATTGATCATATTGTAGATTCTGGAAAGCTGGTCACTGTGTTTAGTGCTCCAGATTACCCACAATTTCAGGCAACAGAGGAGAGGTATAAGAACAAAGGTTCCTATGTTGTCCTTGAACCCCCGAATTTTGACAATCCTATATTTCATGGATTTTCAGCAGTTACTCCAAGGCCGAAGGTGAATGCCTATTACGATTACGAAGAGGTGATAGACTCCGATGAAGAATTGGACTTGGCTTCCATGGTAACTAGCTGA 975 0.4379 MFTANCMICSSSSEMPGSPPEIASLSSTGITWIEELGALKPSCSCWLGRYSCHITYICYEGIMNQNTVHQVYGFEKEVMVKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVTVTPSKRLKGKKNRKINVNHESKILSLGSLEELSKARRSVLDPPWEGPNLIPGDVLWSDPSKTPGLAPNKERGIGLMWGPDCTEEFLKKYQLKLIIRSHEGPDAREKRDGFGGMDEGYTIDHIVDSGKLVTVFSAPDYPQFQATEERYKNKGSYVVLEPPNFDNPIFHGFSAVTPRPKVNAYYDYEEVIDSDEELDLASMVTS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02337 324 PRINTS Serine/threonine phosphatase family signature 95 121 IPR006186 GO:0016787
Pumo4g02337 324 PRINTS Serine/threonine phosphatase family signature 58 82 IPR006186 GO:0016787
Pumo4g02337 324 PRINTS Serine/threonine phosphatase family signature 155 182 IPR006186 GO:0016787
Pumo4g02337 324 PRINTS Serine/threonine phosphatase family signature 249 265 IPR006186 GO:0016787
Pumo4g02337 324 Pfam Calcineurin-like phosphoesterase 73 223 IPR004843 GO:0016787
Pumo4g02337 324 SMART pp2a_7 17 298 IPR006186 GO:0016787
Pumo4g02337 324 Gene3D - 49 322 IPR029052 -
Pumo4g02337 324 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 66 321 - -
Pumo4g02337 324 SUPERFAMILY Metallo-dependent phosphatases 68 299 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02337 Pumo-Chr4 35675400 35685237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02337 71 215 Calmodulin-binding Proteins AT5G63870 73.973 6.02e-73 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02337 K04460 - gmx:100810695 508.834