Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02318 ATGGAATCAAGTGAAGTTATTTTTGTTGGAATTTGGGGCATGGGTGGCATAGGTAAGACAACCATTGCCCGCGCTATATTTAAAAAATATTCTCCTCAATATGAAGGTTGCTGCTTCTTGAATGTAAGAGAAGAATTGGAAAAACAAGGATTGGGTCTTTTAAGAGAGAGACTTATATCTGAGCTAATGGAGGGAGAAGGTCTCCATTCAAGTGGCGCAAGCAAAGCAAGATTCTCCAATTCAGCTGTCAGAAGGATGGGTCGGAAAAAAGTTCTTGTTGTGCTTGATGATGTGAATACTTCTGAACAATTAAAATATCTAGTTGGCGAACGCATTTGCTTTGGTGCAGGGAGTAGAGTGATCATAACAAGTAGAGATAAGCGTGTGCTTACAAGTGGAGGAGTTCGTCAAATTCATGAGGTCAAGGAAATGAACCCTCGAGATTCCCTCAAACTCTTCTGCTTAAATGCATTCAATGAAACCCAACCCAAAATGGGATATGGAAAGCTATCTGATGAGATAGTTAAAATCGCCAAGGGCAATCCATTGGCTCTTACAGTTTTAGGTGCAGATTTCCATTCCAGAAGTACTACAGACATGTGGGAGTGTGCACTAAGCCAAATCAAGAAGTATTCCGATGAGGAAATTCAACGTGTGTTAAGATTTAGTTATGATGGGCTGCGTGACCTCGAGAAGAAGGCATTTCTAGATATTGCGTTCTTTTATAACGAGTACGACAAAGATTATGTCATAAGGCAACTGGATGCTTGCGGTTTCCATGGTACTAGCGGAATAGAGGTTCTGCAACAAAAAGCTCTGATAACAATTTCAAATGGCAATAGAATACAAATGCATGACTTGCTACGAATAATGGGTCACGAAATAGTTCGTCAAGAATCTATTAAATATCCAGGAAGACGCAGCCGATTGAAGGATAGTGAGGATGTATACAATGTATTGAGAAATAAGCTGGGGACTGATGAGCTGGAGGCCATGGAAATAGATGTGTCTAAAATTGCAGATTTACGTTTGAGTGTAGACACTTTTAAAGAGATGCCTCGTCTAAGATTTCTTAAATTTAATTACCCATTGCATGCTGAGCTTTCTATGCCACCAAGCCATGTTCAAGGACTCTTGCAGGACATTGCGGATTCAAAAAGGAGGGACCTTACCATATCCAACATGTTGGTGGAGCTACCACAATTCTCTATGGGGACAAATCTTGAATGTGCAAATCTCAAAAGCTGTGACAGTCCACACGATCTTGTGAGTTCAAGTAGCATTCAAGTTAGTAGATCCAAACAGTCAATAATGTCTCTACAAAGACAAGTTGCGTCACTTTTATCTCGGTGCAAAGAACTCGTGAGTGTTGCAAGCGAGGTTCATATAAAATGTCTTTATTACCTTTTTATTGACGGCTGCTCGAGTCCAAAGGAATTTTCAGTAACTTCAAAGGAAACAGGACAGCTGAACGTAACACACCATGGAATGGAAATATTGAATTCTTCCATTGGGTGCCTGAGCAATCTTGAAGGGTCAGATGTGGAAGATCAACAATTTCAGAATCTGCCTAATGAGCTACTTTGCTTGAGATCTTCGTACTACGTTAAGCTTTCTAAGAGCACGGGACAAGACACTGGGAAACCCAAGCTCCATATTCTGTTTGATGGGTTAAGGTTTTCTCAACGAATATCTTTCGACGACTTGTATTACTCAGTTGCAGTTCTTCAGAATATTAGTGCTTTTTCATGGTGTCGTGAATTAATAGTGGAAGAGAGCAGCGCAGGGAGATTGCTGGAGTATTTGCCTTATGGGACTGCAGTTCGGTGTGTAAGAAGCTTCCGGAATGATTATTGGGACTCCATGATCCATTTCAACTTTATATTTAATCCATACAATTTCGGCACACCTCAATTCTATTTGAAATATAGAATGGTGTCGCAACCGGATGCCCAACGTTATTTCAAAATGAGCCATTTCTGTAGGACGAGGATTAGTTGGTGGGAATTGCTACTCTCACCACAAAGAATTATTATTCTCACCCTAAAAAATGTGAAAATACCCTGTTACCCCTGTCAGCCACCTCCCACCCCACCTCTCCTTCTTCCCCCCACCCCCTCACCTTCCCCGCCCCATACCCACCCCTTCTTCTCACCCCGTTCCCCATTCTCCTCACATTGTCTCCCTCTACAACGTCTCTCCCTCACAAGCCTTCTGCAATGTTTATCCCTCACCTCTCTCCCCAACAGATTTATTATAGCTCGGACGAAGTATGTTTCCTACAATCGTCCACATGATCCTTCCACTTTGGAGGAAGATGCTGTTGCAGATGGTGGTCAGCCTGCCCAACCATCCAGGATAGACCAGTGA 2370 0.4215 MESSEVIFVGIWGMGGIGKTTIARAIFKKYSPQYEGCCFLNVREELEKQGLGLLRERLISELMEGEGLHSSGASKARFSNSAVRRMGRKKVLVVLDDVNTSEQLKYLVGERICFGAGSRVIITSRDKRVLTSGGVRQIHEVKEMNPRDSLKLFCLNAFNETQPKMGYGKLSDEIVKIAKGNPLALTVLGADFHSRSTTDMWECALSQIKKYSDEEIQRVLRFSYDGLRDLEKKAFLDIAFFYNEYDKDYVIRQLDACGFHGTSGIEVLQQKALITISNGNRIQMHDLLRIMGHEIVRQESIKYPGRRSRLKDSEDVYNVLRNKLGTDELEAMEIDVSKIADLRLSVDTFKEMPRLRFLKFNYPLHAELSMPPSHVQGLLQDIADSKRRDLTISNMLVELPQFSMGTNLECANLKSCDSPHDLVSSSSIQVSRSKQSIMSLQRQVASLLSRCKELVSVASEVHIKCLYYLFIDGCSSPKEFSVTSKETGQLNVTHHGMEILNSSIGCLSNLEGSDVEDQQFQNLPNELLCLRSSYYVKLSKSTGQDTGKPKLHILFDGLRFSQRISFDDLYYSVAVLQNISAFSWCRELIVEESSAGRLLEYLPYGTAVRCVRSFRNDYWDSMIHFNFIFNPYNFGTPQFYLKYRMVSQPDAQRYFKMSHFCRTRISWWELLLSPQRIIILTLKNVKIPCYPCQPPPTPPLLLPPTPSPSPPHTHPFFSPRSPFSSHCLPLQRLSLTSLLQCLSLTSLPNRFIIARTKYVSYNRPHDPSTLEEDAVADGGQPAQPSRIDQ 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02318 789 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 238 IPR027417 -
Pumo4g02318 789 SMART AAA_5 5 145 IPR003593 GO:0016887
Pumo4g02318 789 Gene3D - 144 228 IPR042197 -
Pumo4g02318 789 PRINTS Disease resistance protein signature 178 192 - -
Pumo4g02318 789 PRINTS Disease resistance protein signature 85 99 - -
Pumo4g02318 789 PRINTS Disease resistance protein signature 8 23 - -
Pumo4g02318 789 Gene3D - 1 135 IPR027417 -
Pumo4g02318 789 Pfam NB-ARC domain 2 225 IPR002182 GO:0043531
Pumo4g02318 789 SUPERFAMILY "Winged helix" DNA-binding domain 215 320 IPR036390 -
Pumo4g02318 789 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 533 IPR044974 GO:0006952
Pumo4g02318 789 MobiDBLite consensus disorder prediction 764 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02318 Pumo-Chr4 35309896 35315143 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02318 1 539 WRKY Transcription Factor Family AT4G12020 32.101 1.11e-60 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02318 - - gmx:100305455 655.981