Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02312 ATGGGATGGGGTTTTGGCTTCCCAAGGGAATCTCCCCTAGCAATTGATATGTCAACTGCCATCCTAAAACTATCAGAAAATGGTGACCTTCAGAGAATTCATGACAAATGGCTAACAAGAAGTGCCTGCAGCTCAGAGGGTGCAAAACAAGGCATAGACCGACTTGAGCTAAAAAGCTTTTGGGGTCTGTTCCTACTGATTGGCATAGCATGCTTCATTGCTCTCCTTTGCTATGTTATTAGAATGGTCTACCGTTTTAGCAGGCACTCCAATAGTAACCTTGAATGCTCATCGCGCTCTGCTCGTCTTCGATCGTTCCTTTCCTTCGTCAATGAAAGAGAAGGGGAAGACAAATACAGGCCAAAGAGAAGGAGAAAGGAGAAGTGCTCTTGTAGAAAGGTAGTGCATGAAGATGGATCTTTGGATGACTCAACTGTTCGTGTCCACATTGAAGATAATGCCACTGCCCAAGATTAA 477 0.4444 MGWGFGFPRESPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLELKSFWGLFLLIGIACFIALLCYVIRMVYRFSRHSNSNLECSSRSARLRSFLSFVNEREGEDKYRPKRRRKEKCSCRKVVHEDGSLDDSTVRVHIEDNATAQD 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02312 158 Gene3D - 1 45 - -
Pumo4g02312 158 SUPERFAMILY Periplasmic binding protein-like II 2 41 - -
Pumo4g02312 158 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 104 IPR015683 -
Pumo4g02312 158 FunFam Glutamate receptor 4 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02312 Pumo-Chr4 35111119 35112400 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02312 2 126 Ion Channels AT3G51480 56.154 1.67e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02312 K05387 - gmx:100789442 286.189