Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02306 ATGGGAGGCTTATTGCACATGTTTGAGTTCAATCAGGGTAGGATGGCCAAGAAAGTTCATGCCCATAAGAACAATAATGGTGACCTGGAAACCTCTGGAAATGGCATGGAGCTGCAAGTAGAAACATCTCAGGTCCACTGTCCAGCAGGAGAATTACCATACTCTTGTCAAGTAGAAGATGGCTGGTCAAAGAAAATTAGTTACTCAAATGTGGCTTCAGTGAAAAAACTGAACAAAGAGGATTTATCCAAACAATCAGGCACCAGAAATAATGCACCAAGCCTTGTGGCAAGGTTGATGGGGATAGACACCATGCCATTACCATTAGACACTAAATCTGCTGTTCCATTGGATGAAAGCAAACATGAAAATATGGAGAGGAAGTTTTCAGAGAAAGGAATGAATGGAAGGGGTTCGGTTGGTAGGGGTTCCTCCAACTTGAATTCTTTTAGCCGTATGGAATTTGATTCATTTTATCAAGACATTGATGATGATGATGATGATAGATGGGGACAGAATTTTGGAAAACCAAGGCCAAGGGAACATCCTCAGGAAGAGGAACTCCAAAAATTCAAGAAAAAATTTGAAGCATATCAAGCAGCAAGTTTTAAGGAGTGGCCAAAGGTTGTTGATATTGGAAGTGGTTCTAGGAGAATGCTTTCTCAAGAGAACCTGAGCAAGGAAAAGATGCAGCATATTGCAAGTTCAAAGGCAGATAGCTACTCATTTAAGACAAAGCTACCTAATGGTGATATGATGGAGTCAGTCTCAACTAAGAAAAAAGAATCCTTTCCTTCAAGAAGTAAAACACTAAGTAGAGACTTTGAGGAGTCTTTAATGATGAAATCTAGAAGCAGATTAGATATATGTGCTTCTCCCACTCAGATAGTAATCTTGAAGCCTGGTTCTGATACGATTTGCAATTGCAACCATGAAGAGAATTGCATCAGTTTATCAAGCACTTTACATGGGAGAAAAGGCATAGAAGATTTTCTTGAGGAAGTGAGGGAGCGGTTGAAATGTGAGCTGCAAGGGATTAGAGCTAGCGGAATTGAGACACCTTACAATGAAAAACTATCTGATGCTAAAGAGGTCAGAGAAAGTGTGACTAGAGATGCTGAACCAAATTTATTCCGCTCAGAATCAGCAAGATCATACAAAAGTAAAATGCAGTTCAATGGACCAAGTTCCCCAGAATTTTTCAACATAGATACCAGGAGATTCTTGTCAGAGAGGCTAAGAAATATTGTAAAAAGTGAACTGCATTTGGACATTCCTGAAGTGGCTTGTTATTTAGACAATGATAGAGTTAGACTAAAGCAAGATACTATAAAGTGTGCAACTGACAAGTGCCAGTGGGGAATTTTGAAAGAGAAAAAAGAATTACATACAGGTTCCTATAGACATAAATTAGATGACTATGTATTGTTCCACAAGGAGTTGTCTCCTAGAAACCTTGAAAGATCCTTGTCTGCTCCTGCATCAGGAACATCATTTGGGAGGCTTCTTCTAGAGGACCGCCACATTTTAACGGGTGCCCTTATTCAGAGGAAGCTTGAAGCTGTTGAAGCAAAGCCTGTAGATGTTAAGAAACAGAAGAAAAATGGATTCAATATTAAAGAAAAACTTTCCAATTTTAAATATACTCTTGGTCTAAGAGGGAAGTTGTTTGGCAAAAGGGTTCAGTCAATAGTAGAATCACATGGCAGTGAATATGGTCCAATTTTGAGAGATATCAGGAATGGACCAACTGTTCTCATGAAATATGGTGAGAGACATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCTGTGCTCATGAAGAACATTGGAGACAGACTGGATATTCAAGTCTAACATCAACTCCAGATGTATCTTCATTAGATGATATTTTTGTTCCCAAGGCTTTTAGAGATATCAGCTCTGGTTTGAATGAGCTAAAGAGGCAACTCAGTCAACTCGATTCCGACGGCTCTGAGGACTTCACCACAAAGAAGGAGGCTATTGAGTCCGAGTTAGTTCAATTGGATGATCCAGCAGAATCTTACGTAAGAGATCTGCTTGTTGCCTCTGGTTTGTACTTTGGTTCATGGGATAAATCTCTATTAAGAGGGGACACATTTGCAAATCCTATTGGCAACTCAGTTTTTGAAGAAGTGGAAGAGTCTCATAAGAAATTGGTGAAGGAGAATGAAAGATCCACAAAGGATCAGAACAAGAACAAGTTAGAGCACAAGGTTTTGCTTGATTTGTTAAATGACGCACTTTCCATTGTTCTTGGACCACCTTTGACACTGTCTAGATTCAGAAGGAAACTAAGCAATTCCTCCATGCAGCCTCCACCATGTGGAAAGGAACTACTGAAGTTAGTGTGGGACATTGTCAGTGTTTCATTGTATCCTACTCCTAACACATGTCTTTATTCAATTGATAGTTTGGTGACACAAGATCTAGGATCTATCTCCTGGTCTGGACTAACAAATGATCAGATTGATACATTGGAAAGAGAGATGGCATGTGTAATCACTGATGATTTGGTTGAAGAATTCACAAAGGATATGCTCTTTTAG 2583 0.3964 MGGLLHMFEFNQGRMAKKVHAHKNNNGDLETSGNGMELQVETSQVHCPAGELPYSCQVEDGWSKKISYSNVASVKKLNKEDLSKQSGTRNNAPSLVARLMGIDTMPLPLDTKSAVPLDESKHENMERKFSEKGMNGRGSVGRGSSNLNSFSRMEFDSFYQDIDDDDDDRWGQNFGKPRPREHPQEEELQKFKKKFEAYQAASFKEWPKVVDIGSGSRRMLSQENLSKEKMQHIASSKADSYSFKTKLPNGDMMESVSTKKKESFPSRSKTLSRDFEESLMMKSRSRLDICASPTQIVILKPGSDTICNCNHEENCISLSSTLHGRKGIEDFLEEVRERLKCELQGIRASGIETPYNEKLSDAKEVRESVTRDAEPNLFRSESARSYKSKMQFNGPSSPEFFNIDTRRFLSERLRNIVKSELHLDIPEVACYLDNDRVRLKQDTIKCATDKCQWGILKEKKELHTGSYRHKLDDYVLFHKELSPRNLERSLSAPASGTSFGRLLLEDRHILTGALIQRKLEAVEAKPVDVKKQKKNGFNIKEKLSNFKYTLGLRGKLFGKRVQSIVESHGSEYGPILRDIRNGPTVLMKYGERHENSTEVPPSPASVCSCAHEEHWRQTGYSSLTSTPDVSSLDDIFVPKAFRDISSGLNELKRQLSQLDSDGSEDFTTKKEAIESELVQLDDPAESYVRDLLVASGLYFGSWDKSLLRGDTFANPIGNSVFEEVEESHKKLVKENERSTKDQNKNKLEHKVLLDLLNDALSIVLGPPLTLSRFRRKLSNSSMQPPPCGKELLKLVWDIVSVSLYPTPNTCLYSIDSLVTQDLGSISWSGLTNDQIDTLEREMACVITDDLVEEFTKDMLF 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02306 860 MobiDBLite consensus disorder prediction 169 186 - -
Pumo4g02306 860 Pfam Domain of unknown function (DUF4378) 686 853 IPR025486 -
Pumo4g02306 860 MobiDBLite consensus disorder prediction 166 186 - -
Pumo4g02306 860 Pfam DUF761-associated sequence motif 91 106 IPR032795 -
Pumo4g02306 860 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 859 - -
Pumo4g02306 860 Coils Coil 721 741 - -
Pumo4g02306 860 MobiDBLite consensus disorder prediction 119 142 - -
Pumo4g02306 860 MobiDBLite consensus disorder prediction 119 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02306 Pumo-Chr4 35016240 35021655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02306 74 858 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 37.683 8.77e-134 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02306 - - gmx:100810825 1456.43