Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02267 ATGGGTATGTCGTCCCAAAAATGGTTCAGAATTTTTCGAGGGAGATTCCTCCGATCATCCAACAAAGACATCACTCTCCCTCGCACAAGTATTTGCACTAATGAATGCGAAGAAGCCATACTTTGGAATGAAGACTTCAGTTTCCCAACACCAATTTCTTCGGTCTCCAACGAAGATGTTGCGGCCATTAAGATCCAAGCTTGTTTCAGGGGACATCTAGCCAGACGAGCATATAGGGCTTTAAAAAGCCTAGTGAAGCTGCAAGCATTGGCTCGTGGGGTGTGGGTGAGGAAACAGTCACGGATAGCAATGCAGTGTATGCACGCACTTGTACGATTACAAGTCAGGGTTCGTGCAAGGCAGCTACTTGGTAGCTTTGATAAGGAACAACAAACTAATTTACAAAATAAGTCTTCTCCGATGGCCAGAGTTTAA 435 0.4483 MGMSSQKWFRIFRGRFLRSSNKDITLPRTSICTNECEEAILWNEDFSFPTPISSVSNEDVAAIKIQACFRGHLARRAYRALKSLVKLQALARGVWVRKQSRIAMQCMHALVRLQVRVRARQLLGSFDKEQQTNLQNKSSPMARV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02267 144 PANTHER IQ-DOMAIN 5-RELATED 53 133 - -
Pumo4g02267 144 SMART iq_5 80 101 IPR000048 GO:0005515
Pumo4g02267 144 SMART iq_5 57 79 IPR000048 GO:0005515
Pumo4g02267 144 Pfam IQ calmodulin-binding motif 61 79 IPR000048 GO:0005515
Pumo4g02267 144 Pfam IQ calmodulin-binding motif 82 99 IPR000048 GO:0005515
Pumo4g02267 144 Gene3D - 58 109 - -
Pumo4g02267 144 ProSiteProfiles IQ motif profile. 82 109 IPR000048 GO:0005515
Pumo4g02267 144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 102 IPR027417 -
Pumo4g02267 144 ProSiteProfiles IQ motif profile. 58 86 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02267 Pumo-Chr4 33989851 33991019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02267 4 123 IQD Protein Family AT3G51380 53.333 8.15e-35 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02267 - - gmx:100788207 214.927