Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02258 ATGCTATCAAGGTTGATGGACTTTCTGACTGCCTGCTGGCGGCGAAGATCCTCCGACGGCAAGGGTTCCGAGGTTTCGGGGCGGAAGGAGGGGCTGCTGTGGTACAAGGATGCCGGGCAGCACTTGTTTGGTGAATACTCAATGGCTGTGGTCCAGGCCAACAACTTGCTTGAGGATCAGAGCCAGATTGAGTCTGGTCCTCTCAGCTTGCTTGACACTGGCCCCTATGGGACCTTTGTTGGTGTGTATGATGGACATGGTGGACCCGAGACGTCGCGCTACGTTTGTGATCATCTCTTCCAACATCTAAAACGATTTGCATCTGAGCAGAAGTCCATGTCTGTGGAGGTTATTCGGAAGGCGTACCAAGCCACGGAAGAAGGATTTTTGTCAGTGGTTACCAAACAGTGGCCTATGAATCCCCAGATTGCTGCTGTGGGATCTTGTTGTTTGGTTGGTGTGATTTGTGGTGGTATCCTCTATATTGCTAACCTTGGTGATTCCCGTGCTGTGCTTGGCCGGGTTGTCAGAGCAACTGGGGATGTTTTGGCGATCCAGCTTTCGTCAGAGCATAATGTGGGCATAGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCGGATGACTCAAAAATTGTGGTTCTAAAGCACAATGTATGGCGGGTGAAGGGTCTGATACAGATTTCTAGATCCATTGGCGATGTATACCTAAAAAAGGCTGAATTCAACAAGGAACCATTGTATGCTAAGTTTCGTGTCCGGGAAGGTTTTAAGAGGCCCATTTTGAGCTCTGACCCATCAATTTCTGTTCATGAACTACAACAGCATGATCAATTTCTCATATTTGCTTCTGATGGTCTTTGGGAACACCTTAGCAATCAGGATGCCGTTGATATAGTTCAAAACAACCCACACAATGTAAGATAA 927 0.4757 MLSRLMDFLTACWRRRSSDGKGSEVSGRKEGLLWYKDAGQHLFGEYSMAVVQANNLLEDQSQIESGPLSLLDTGPYGTFVGVYDGHGGPETSRYVCDHLFQHLKRFASEQKSMSVEVIRKAYQATEEGFLSVVTKQWPMNPQIAAVGSCCLVGVICGGILYIANLGDSRAVLGRVVRATGDVLAIQLSSEHNVGIESVRQEMHSLHPDDSKIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNKEPLYAKFRVREGFKRPILSSDPSISVHELQQHDQFLIFASDGLWEHLSNQDAVDIVQNNPHNVR 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02258 308 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Pumo4g02258 308 SUPERFAMILY PP2C-like 53 302 IPR036457 -
Pumo4g02258 308 PANTHER PROTEIN PHOSPHATASE 29 304 IPR015655 GO:0004722|GO:0006470
Pumo4g02258 308 Pfam Protein phosphatase 2C 78 303 IPR001932 -
Pumo4g02258 308 SMART PP2C_4 37 308 IPR001932 -
Pumo4g02258 308 FunFam Phosphatase 2C family protein 34 308 - -
Pumo4g02258 308 Gene3D - 30 308 IPR036457 -
Pumo4g02258 308 ProSiteProfiles PPM-type phosphatase domain profile. 42 308 IPR001932 -
Pumo4g02258 308 CDD PP2Cc 43 304 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02258 Pumo-Chr4 33708184 33716367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02258 1 306 PP2C-type Phosphatase Gene Family AT3G51370 79.085 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02258 K01102 - gmx:100777920 608.216