Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02247 ATGCTGTCATCATCCACCACCACCTGCCACAAAAACAACCTGAACCACAACGCTCCCTCTTCCTCAACAACAAAACCACCACCACCACCATTATCCTCACACTTTTCACACCAAACTCCAAGAATCACCACCACCACCACCACCAACAACAAGGCCATGGAAGATGTCTGGGAAGGCATCAACCTCACTTTCTTGAGTGACCACACTACCACCCACACCTCCACCAAAGCTGCAAAATTTCAGGACTTTCTAGCCTCAGACCCTTCTCCTCCTGTGACTGCTCTGACCTTGAGCACGCGTTCTGAGTTCCACTTCGACCCTCTCCCGCACAAGGACCTGCAATTGGCGCTGCCCCACCACAGCAATGCCCCAAAGGTTGAACCTTTTCGCCACCCATTTGGGAATAAGAGGCCTTTCCCATCTGGGGACATGCAAAAAATGCGACTCCTGAAGAATCGCGAATCTGCTGCACGATCAAGAGCGAGAAAGCAGGAAAATATTGCTTCTTTAATTTTTCATTACTATCTCGCTTTCAATACCTTTTAG 546 0.4927 MLSSSTTTCHKNNLNHNAPSSSTTKPPPPPLSSHFSHQTPRITTTTTTNNKAMEDVWEGINLTFLSDHTTTHTSTKAAKFQDFLASDPSPPVTALTLSTRSEFHFDPLPHKDLQLALPHHSNAPKVEPFRHPFGNKRPFPSGDMQKMRLLKNRESAARSRARKQENIASLIFHYYLAFNTF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02247 181 MobiDBLite consensus disorder prediction 35 50 - -
Pumo4g02247 181 MobiDBLite consensus disorder prediction 1 21 - -
Pumo4g02247 181 SUPERFAMILY Leucine zipper domain 146 171 IPR046347 GO:0003700|GO:0006355
Pumo4g02247 181 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 148 162 IPR004827 GO:0003700|GO:0006355
Pumo4g02247 181 MobiDBLite consensus disorder prediction 122 143 - -
Pumo4g02247 181 MobiDBLite consensus disorder prediction 1 50 - -
Pumo4g02247 181 Gene3D - 145 171 - -
Pumo4g02247 181 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 24 164 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02247 Pumo-Chr4 33221924 33222469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02247 53 165 bZIP Transcription Factor Family AT4G35900 32.000 1.75e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02247 K14432 - gmx:102667912 181.8