Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02241 ATGACTTTACTCTATCAAAAACTATTTTCCCAATGGCTTCTAGTCATTCTTTGGTGTTCTATCATAGCCACCATCTTCCAACATGTTTCTGCTGTGATCCTACCAAACAATGAAACTGTACCAGCAGTGATTGTATTTGGGGACTCTGTAGTAGATCCAGGAAACAACAACTATATCACCACACTTGTCAAATGCAATTTCCCACCATATGGTAGAGATTTTGCTGAAGGAAATCATCCAACTGGGAGGTTCAGCAATGGCTTAGTCCCATCTGACATAATTGCTGCAAAATTTGGAGTCAAGAAGCTTTTACCTGCTTATCTTGACCCAAATTTGCAACTTCAAGATCTCCTCACTGGTGTAAGCTTTGCCTCAGGTGGTGCCGGATTTGATCCTCTAACAGCTGAATTAGTGGAACTTTATGGACTAGGAGCTAGAAGGATTGGAGTATTTGGTTTACCAGCCATAGGGTGTGTGCCCTCACAAAGAACACTTGGTGGAGGCTTGGATAGAGCATGCTCAGATTCTTCTAACCAAGCAGCAATGCTCTTCAACTCGAAGCTCTTCTCCCAAATGAACGTACTTGGAAAAAAGTTTTCAGATGCTAGGCTTGTTTATCTTGATTCTTACAACGGATTGCTAAACATGATTCAAAATCCTACTAAATACGCTTTTGGTGATTCAATCTTGGATACTGGGAACAACGATTATATTGAAACAATTATGAAGGCAAATTTCAAACCATATGGAAGGGATTTCATTGGAGGAGAAGCCACAGGAAGGTTTTGCAATGGCAGGATCCCTTCAGACTTTTTAGCTGAAATACTTGGAATAAAGGATGCATTGCCACCCTATCTTAATCCAGATCTTGAGATTGAAGACCTCTTAACTGGGGTGTGTTTTGCCTCTGCCGGCTCAGGATTTGATCCTCTAACAATAGAACTAGCATCAGTGTTGTCAATAGACGATCAACTAAGCATGTTCAAAGAGTACATAGGAAAACTGAATGCAATTGTGGGGGAAGCAAGGACAGCTCTCATTCTAGCAAAAAGCATATTTGTCATCAGCATGGGAAGCAATGACATTGCAGGAACATATTTCATGACACCATACCGGAGAGATGAGTATAATGTTGAAGAGTATACAAGTATGCTAGTCAATATATCTTCAAATTTTCTTCAGGAACTTTATAAATTTGGAGCAAGAAAGATTGGAGTACTCAGCCTATCTCCAATAGGATGTGTGCCATTGCAAAGAACATTAGGGGGAGGCAAAGAAAGGGATTGTGTAGTATCAATAAACCAAGCAGTCATGGTCTACAACTCCAAGCTTTCTTCTTCAATTATGGCCCTCAACAAAAGTCTTCCAGAAGCTAGGCTTGTCTACCTTGAAAACTATAGTGAATTCAATGAATTTATCCAACACCCCAATAAATTTGCCATATCACAAACAGAATATAGAAAGTTTGCATTTCCTGCTGTCATAGCTTTTGGTGATTCAGTCTTGGATACTGGGAACAACAATTATATTGAAACAATAGTGAAGGCAGATTTCAAACCATATGGGAGGGATTTCTTTGGAGGAAAAGCCACGGGAAGGTTTAGCAATGGCAGGATCCCTTCAGATTTTTTAGCTGAAATACTTGGAATAAAGGAGACCTTGCCACCCTATCTTGATCCAAATCTGAAGATCAAAGACCTCTTAACTGGGGTGTGTTTTGCCTCTGCTGGCTCAGGATATGATCCTCTAACAGTAGAACTAGCATCAGTGTTGTCAGTAGAGGATCAACTAGATATGTTCAAAGATTACATAGGAAAACTGAAGGCAGTTGTGGGGAAAGCAAGGACAGCTCTCATTCTAGCAAAAAGCATATTTATCATCAGCATGGGAAGCAATGACATTTCAGGAACATATTTCATGTCACCATACCGCAGAGATGAGTATAATGTTGAAGAGTATGCAAGTATGGTAGTCAATATATCTTCAAATTTTCTTCAGGAACTTTATAAATTTGGAGCAAGAAAGATTGGAGTAGTGAGCCTATCACCAATAGGATGTGTGCCACTGCAAAGAACATTAGGCGGAGGCAAAGAAAGGAATTGTGTAGAATCAATAAACCAGGCAGCCACAGTCTACAACTCCAAGCTTTCTTCTTCAGTTGTGGCCCTCAACAAAAGTCTTCCAGAAGCTAGGCTTGTCTACCTTGAAAACTATAGTGAATTCAATGAACTTATCCAACACCACAACCAATTTGGATTTGAAGTTGTGGATAGTGCATGCTGTGGCGTTGCAAATATTGAATCAGGCCCTCTCTGTAATTCTTTCTCCTTAAAAATTTGTGATAATGCAACTAAATATGTGTTCTGGGACAGTGTTCACCCCACTGAGCAAACTTACAAAATACTAGTCTCAGATATGAAAAAATATTGTGTTTTAGAACGAAAAAACTATGGTTCACGTCTCTACAAAGTTGTAGTTCACGTATCACGAAAATCAAACATACCTTGTAAAACAATAATTTCAATCGTTCCATAA 2535 0.3937 MTLLYQKLFSQWLLVILWCSIIATIFQHVSAVILPNNETVPAVIVFGDSVVDPGNNNYITTLVKCNFPPYGRDFAEGNHPTGRFSNGLVPSDIIAAKFGVKKLLPAYLDPNLQLQDLLTGVSFASGGAGFDPLTAELVELYGLGARRIGVFGLPAIGCVPSQRTLGGGLDRACSDSSNQAAMLFNSKLFSQMNVLGKKFSDARLVYLDSYNGLLNMIQNPTKYAFGDSILDTGNNDYIETIMKANFKPYGRDFIGGEATGRFCNGRIPSDFLAEILGIKDALPPYLNPDLEIEDLLTGVCFASAGSGFDPLTIELASVLSIDDQLSMFKEYIGKLNAIVGEARTALILAKSIFVISMGSNDIAGTYFMTPYRRDEYNVEEYTSMLVNISSNFLQELYKFGARKIGVLSLSPIGCVPLQRTLGGGKERDCVVSINQAVMVYNSKLSSSIMALNKSLPEARLVYLENYSEFNEFIQHPNKFAISQTEYRKFAFPAVIAFGDSVLDTGNNNYIETIVKADFKPYGRDFFGGKATGRFSNGRIPSDFLAEILGIKETLPPYLDPNLKIKDLLTGVCFASAGSGYDPLTVELASVLSVEDQLDMFKDYIGKLKAVVGKARTALILAKSIFIISMGSNDISGTYFMSPYRRDEYNVEEYASMVVNISSNFLQELYKFGARKIGVVSLSPIGCVPLQRTLGGGKERNCVESINQAATVYNSKLSSSVVALNKSLPEARLVYLENYSEFNELIQHHNQFGFEVVDSACCGVANIESGPLCNSFSLKICDNATKYVFWDSVHPTEQTYKILVSDMKKYCVLERKNYGSRLYKVVVHVSRKSNIPCKTIISIVP 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02241 844 Pfam GDSL-like Lipase/Acylhydrolase 494 803 IPR001087 GO:0016788
Pumo4g02241 844 Pfam GDSL-like Lipase/Acylhydrolase 223 472 IPR001087 GO:0016788
Pumo4g02241 844 PANTHER GDSL ESTERASE/LIPASE EXL3 138 225 - -
Pumo4g02241 844 Gene3D SGNH hydrolase 31 135 IPR036514 -
Pumo4g02241 844 Gene3D SGNH hydrolase 136 224 IPR036514 -
Pumo4g02241 844 Gene3D SGNH hydrolase 488 810 IPR036514 -
Pumo4g02241 844 Gene3D SGNH hydrolase 225 487 IPR036514 -
Pumo4g02241 844 CDD SGNH_plant_lipase_like 220 479 IPR035669 -
Pumo4g02241 844 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 494 505 IPR008265 GO:0006629|GO:0016298
Pumo4g02241 844 FunFam GDSL esterase/lipase APG 486 810 - -
Pumo4g02241 844 FunFam GDSL esterase/lipase APG 223 485 - -
Pumo4g02241 844 CDD SGNH_plant_lipase_like 492 804 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02241 Pumo-Chr4 33113576 33131413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02241 490 807 Pollen Coat Proteome AT1G75910 40.673 4.04e-73 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02241 - - mtr:11443183 797.349