Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02232 ATGTCACAAGTTAAAAATATGAAGTACTCATTTCCTGCTGTTATAGCGTTTGGTGATTCAATCTTGGATACTGGGAACAACGATTATATTGAAACATTTCTGAAGGCAAATTTCAAACCATACGGGAGAGATTTCATTGGAGCAAAATCCACAGGAAGGTTTTGCAATGGCAAGATCCCTTCAGACTTTTTTGCTGAAAAACTTAGTGTAAAGGAGGCCTTGCCACCCTATCTGGATCCAAATTTGAAGGTTGAAGACCTCTTAACCGGGGTGTCCTTTGCCTCTGCCGGTTCAGGATATGATCCTTTTACAGTTAAACTAGATAGGGTATTGTCAGTGGAGGATCAGCTACTTATGTTCAAAGAGTACATAGGAAAACTGAAGGCAGCTGTAGGGGAAGAAAGGACAGCTCTCATTCTTGCAAAAAGCTTGTTTCTTGTCAGCTTGGGAAGCAATGATATTTCAGTAACATATTTTCTGACACCATTCCGGAAGAATGAGTATGATATCGAAGAGTATACAAGTATGCTGATTGATATGTCTTCCAATTTTCTACAGGAACTTTATCAACTGGGAGCAAGAAGGATTGGAATAATTGGCTTATCACCAGTAGGATGTGTGCCAATGCAAAGAACAGCAAGAGGAGGCAGAGAAAGGAAGTGTGTAGAATCAGTAAACCAGGCATCCATGGTCTATAACTCCAAGCTTTCTTCTTCAATTATGGCTCTCAACAAAAGCCTTCCAGATGCTAGGCTTGTCTACCTTGAAAACTATAGTAAATTGAGCGGACTTATTCAACAGTACAATCAGTCTGGATTTGAAGTGGCGGATAATGCATGCTGTGACATTGCAAATGTTGAATTTGGATTTATCTGTAATTTTCTCTCCATAAAAGTCTGTCATGATGCCTCTAAATATGTGTTCTGGGACGGTTATCACCCCACGGAGAGAACTTACAATATACTTGTTTCAGAGGCCATAAAAAAGAACGTTGATAAGTTTGTTTGA 1008 0.3948 MSQVKNMKYSFPAVIAFGDSILDTGNNDYIETFLKANFKPYGRDFIGAKSTGRFCNGKIPSDFFAEKLSVKEALPPYLDPNLKVEDLLTGVSFASAGSGYDPFTVKLDRVLSVEDQLLMFKEYIGKLKAAVGEERTALILAKSLFLVSLGSNDISVTYFLTPFRKNEYDIEEYTSMLIDMSSNFLQELYQLGARRIGIIGLSPVGCVPMQRTARGGRERKCVESVNQASMVYNSKLSSSIMALNKSLPDARLVYLENYSKLSGLIQQYNQSGFEVADNACCDIANVEFGFICNFLSIKVCHDASKYVFWDGYHPTERTYNILVSEAIKKNVDKFV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02232 335 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 14 25 IPR008265 GO:0006629|GO:0016298
Pumo4g02232 335 PANTHER GDSL ESTERASE/LIPASE EXL3 11 325 - -
Pumo4g02232 335 Gene3D SGNH hydrolase 2 331 IPR036514 -
Pumo4g02232 335 FunFam GDSL esterase/lipase APG 3 331 - -
Pumo4g02232 335 Pfam GDSL-like Lipase/Acylhydrolase 14 324 IPR001087 GO:0016788
Pumo4g02232 335 CDD SGNH_plant_lipase_like 12 330 IPR035669 -
Pumo4g02232 335 SUPERFAMILY SGNH hydrolase 140 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02232 Pumo-Chr4 32999823 33002302 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02232 10 328 Pollen Coat Proteome AT1G75910 41.358 6.08e-80 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02232 - - gmx:100776321 587.8