Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02226 ATGGGTTCTGTTGGAATTGAAAGCTCGGGAACCGATGTTGTCACCGTTGATGTACATGCAGCCAAGGGTCTGATCCAGACCAGCCATGTTTATCTTGATGTCAGGACGGTGGAAGAGTTCCAGAAAGGGCATGTGGATGCAGAGAAGATCATTAACATTCCGTACATGTTTAATACACCAGAAGGCCGGGTGAAGAACCCGGAATTTCTGAAGGAGGTTTCATCTGCTTGCAAGAAAGAAGATCACATCATCGTGGGTTGTCAAAGTGGAGTTAGATCTCTGTATGCAACTGCTGATCTTCTGACCCAAGGCTTTAAGGATGTGAGCAACATGGGAGGAGGTTATCTGGATTGGGTTAAAAATGAATTTCCAGTGAAATCACCTTTGGACTTGGTTAAAAATGAATTGCCAGTGAAAACACCTTTAGACTTGGTTAAAAATGAAGTTCCAGTGAAAGCACCTTTGGTTGGTTAA 474 0.4346 MGSVGIESSGTDVVTVDVHAAKGLIQTSHVYLDVRTVEEFQKGHVDAEKIINIPYMFNTPEGRVKNPEFLKEVSSACKKEDHIIVGCQSGVRSLYATADLLTQGFKDVSNMGGGYLDWVKNEFPVKSPLDLVKNELPVKTPLDLVKNEVPVKAPLVG 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02226 157 FunFam Thiosulfate sulfurtransferase 16, chloroplastic 4 126 - -
Pumo4g02226 157 PANTHER THIOSULFATE SULFURTRANSFERASE 18 7 127 IPR044684 GO:0003824
Pumo4g02226 157 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
Pumo4g02226 157 SMART rhod_4 16 124 IPR001763 -
Pumo4g02226 157 Gene3D - 6 127 IPR036873 -
Pumo4g02226 157 Pfam Rhodanese-like domain 25 120 IPR001763 -
Pumo4g02226 157 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 13 125 IPR036873 -
Pumo4g02226 157 CDD RHOD 20 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02226 Pumo-Chr4 32859691 32861159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02226 3 127 Sulfurtransferasese or Rhodanese AT5G66170 56.000 2.09e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02226 - K15692 gmx:100792251 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02226 4 32859691 32861159 Pumo4g02226 4 32859691 32861159 ECH
Pumo8g01676 8 52790051 52792604 Pumo4g02226 4 32859691 32861159 PCT