Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02215 ATGGCTTCATGCACGACGCTATACCAGATTCTGGGGATCCACACCGCCGCATCCAACGAGGAAATCAAGGCGGCGTACCGGCGATTGGCGAGGGTCTGCCACCCTGACGTGGCGCCGGTGGACCGAAAGGAATATGCTGCGGGCGAGTTCATGAAGATCCATGCTGCGTACCGCACGCTATCAGATCCCGAGAAGCGTGCCAGCTATGATAGAAGCTTGTTCCTCGGACGTCAGCGACCGCTCACAATGACGTCGTCGTCGTCGTCGGGGTTTTCCGGCTACAGTGGGCGAAACTGGGAAACAGACCAGTGTTGGTAG 318 0.5849 MASCTTLYQILGIHTAASNEEIKAAYRRLARVCHPDVAPVDRKEYAAGEFMKIHAAYRTLSDPEKRASYDRSLFLGRQRPLTMTSSSSSGFSGYSGRNWETDQCW 105
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02215 105 MobiDBLite consensus disorder prediction 82 105 - -
Pumo4g02215 105 PRINTS DnaJ domain signature 26 41 IPR001623 -
Pumo4g02215 105 PRINTS DnaJ domain signature 45 65 IPR001623 -
Pumo4g02215 105 PRINTS DnaJ domain signature 8 26 IPR001623 -
Pumo4g02215 105 CDD DnaJ 6 62 IPR001623 -
Pumo4g02215 105 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Pumo4g02215 105 Pfam DnaJ domain 7 70 IPR001623 -
Pumo4g02215 105 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 3 105 - -
Pumo4g02215 105 Gene3D DnaJ domain 1 89 IPR036869 -
Pumo4g02215 105 SMART dnaj_3 5 65 IPR001623 -
Pumo4g02215 105 SUPERFAMILY Chaperone J-domain 2 81 IPR036869 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo4g02215 Pumo-Chr4 32653260 32653577 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02215 8 75 C2H2 Transcription Factor Family AT1G74250 43.243 2.02e-09 51.6