Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02214 ATGCTCACAGCATCTTTCCCTACACCCGCCGCAACTTTCTCCGGTGAGAGCGTCTCCTCGGCGTTGCGCCACGTCAGATTCCGGTCAGTGGTATCCTTCGTCACCGCCACCGCCACCACCGAAGCAAGGTCTACTTGGACCGAAGAGCAACAACAACAGAGGCCAAATTCGTGTCTAAGCTCTCACAGCATGGCTTCGTGCACGACGCTGTACCAGATTCTGGGAATCCGAGCCGCTGCGTCCGACGAGGAAATCAAGGCGGCGTACCGGCGACTGGCGAGGGTATGCCACCCTGACGTGGCGCCGGTGGACCGAAAGGAATCCTCTGCGGGCGAGTTCATGAAGATCCATGCTGCGTACCGCACGCTATCGGATCCTGAGAAGCGCGCCAGCTACGATAGAAGCTTGTTCCTCCGGCGTCAGCGACCGCTCACAATGACGACGTCGACATCTGGGTTTTCCGGCTACAGTGGGCGGAACTGGGAAACAGACCAGTGTTGGTAG 504 0.5913 MLTASFPTPAATFSGESVSSALRHVRFRSVVSFVTATATTEARSTWTEEQQQQRPNSCLSSHSMASCTTLYQILGIRAAASDEEIKAAYRRLARVCHPDVAPVDRKESSAGEFMKIHAAYRTLSDPEKRASYDRSLFLRRQRPLTMTTSTSGFSGYSGRNWETDQCW 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02214 167 ProSiteProfiles dnaJ domain profile. 69 136 IPR001623 -
Pumo4g02214 167 Gene3D DnaJ domain 55 151 IPR036869 -
Pumo4g02214 167 SMART dnaj_3 68 128 IPR001623 -
Pumo4g02214 167 Pfam DnaJ domain 70 133 IPR001623 -
Pumo4g02214 167 CDD DnaJ 69 125 IPR001623 -
Pumo4g02214 167 PRINTS DnaJ domain signature 108 128 IPR001623 -
Pumo4g02214 167 PRINTS DnaJ domain signature 89 104 IPR001623 -
Pumo4g02214 167 PRINTS DnaJ domain signature 71 89 IPR001623 -
Pumo4g02214 167 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 13 167 - -
Pumo4g02214 167 SUPERFAMILY Chaperone J-domain 63 139 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02214 Pumo-Chr4 32645642 32646271 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02214 60 133 C2H2 Transcription Factor Family AT1G74250 42.308 6.96e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02214 - - gmx:100795760 207.223