Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02213 ATGAGGGTTTTTCAAGACCTTTTCCTACACCTACTGTTACTGTTACTTTCTCCGGTAAAAGCGTTTCATCGCCGCCGCGCCACGTCAGATTCCAGGTCAGTGGCGTCCTTCGCCGCCGCCACTCGGACGGAGGAGCAGCGGCGCAGGCCCGCTTCGTATCTGAGCCCTCACGGCATGGCCTCCTCGTGCACGACGCTGTACGAGATTCTGGGAATCCGCGCCGCCGCGTCCGGCGAGGAGATCAAGGCGGCGTACCGGCGGCTTGCGAGGGTCTGCCACCCCGACGTGGCGCCGGTGGAGCGAAAGGAATCCTCTGCGGGCGAGTTCATGAAGATCCACGCTGCGTACTGCACCCTTTCGGACCCCGAGAAGCGTGCCACCTATGATCGAAGCTTGTTCCGGCGCCAGCAGCGGCCTCTCACAACGACGTCGTCCCGGGGTTCCGGCTACAGCGGACGGAACTGGGAAACGGACCAGTGTTGGTAG 486 0.6296 MRVFQDLFLHLLLLLLSPVKAFHRRRATSDSRSVASFAAATRTEEQRRRPASYLSPHGMASSCTTLYEILGIRAAASGEEIKAAYRRLARVCHPDVAPVERKESSAGEFMKIHAAYCTLSDPEKRATYDRSLFRRQQRPLTTTSSRGSGYSGRNWETDQCW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02213 161 ProSiteProfiles dnaJ domain profile. 65 132 IPR001623 -
Pumo4g02213 161 PRINTS DnaJ domain signature 67 85 IPR001623 -
Pumo4g02213 161 PRINTS DnaJ domain signature 85 100 IPR001623 -
Pumo4g02213 161 PRINTS DnaJ domain signature 104 124 IPR001623 -
Pumo4g02213 161 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 25 161 - -
Pumo4g02213 161 CDD DnaJ 65 121 IPR001623 -
Pumo4g02213 161 SMART dnaj_3 64 124 IPR001623 -
Pumo4g02213 161 MobiDBLite consensus disorder prediction 33 57 - -
Pumo4g02213 161 SUPERFAMILY Chaperone J-domain 61 135 IPR036869 -
Pumo4g02213 161 MobiDBLite consensus disorder prediction 135 161 - -
Pumo4g02213 161 Pfam DnaJ domain 66 129 IPR001623 -
Pumo4g02213 161 Gene3D DnaJ domain 55 148 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02213 Pumo-Chr4 32623418 32625010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02213 67 129 C2H2 Transcription Factor Family AT1G74250 44.776 1.00e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02213 - - gmx:100795760 206.838