Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02206 ATGGAGGTCGAGGTGCCAATCTCACTTGATTCGAATAATCTACTTCACCCAGAGACTGTTGTTTCTGTTCAAATTGGGGATTCTGGTGTTTCCTCATCTATTTCAAATGCTGTTAACCCACATCAACCTGCTACAAAAAAGCCGACCAGGCAGTGGGCTGCGTGGACTCGACAAGAGGAGGAAAGTTTCTTCACCGCGTTACGACAAGTTGGGAAGAATTTTGAGAAAATCACTTCCCGTGTACAAAGTAAAAACAAGGATCAGGTCAGGCATTATTACTACCGGCTTGTGAGACGGATGAACAAACTTCTTGGTCCAGGATTATGTTTGGATGCCAAAAATTCTAAAGATACTAATGCTGCAATGCTTCGCTGGTGGTCTTTATTAGAAAAGTATAGCTGCAAAGCCTCAAAGCTTCACCTGAAGCCCCGAAGATTTAAAATTTTTTTAGAAGCCTTGGAGCACCAATTACTGAAGGACCGGAAGAAGAATGTAAGGAAACGACCCTTACAGGGGGCGAATTGTCTTCCTTCTGTGCCTACTGCAGTCTCAAATCAAAGTAGGGCATCAGGAAATGATGCCCGTGCAGTTAAACTGGTTCTTGTTGACAGTCAAAATATTTTAAAATTGGGACCTTCAAAACCATCAACAAAGCGCAATGTAAACATGGGTGTTAACCGTAGTAACACTAAGGGAGATTCAAATACCATGAAACCAACAAGGCAACGAAAGAAATCTGGTTCGATTTCAACAGCTGCATATAGAAAATGGGAGAAGGCTGCAATGGCTGGTGTTTCTTTAGTTGCAGATGCTGCTGAGCATTTGGAGCGAGCTGCGACTGTTAAAGAAATTGACCAAGACCAGGAGAATCCAGGAGAAAAATGTTCTGACCCTGCTGATTATGTCCTGCCCTCTTTACCCACATGTCCACAAAATCAATTTGTTGATAACAATGTGAATAATAGTATGAAACTTAAGCTCCAGTTATTTCCAATTGATGAACCTACTCGAAGAGCATTGGAAATGGATAAGCATAATCCCCACCTGGAGCTTACACTTAGCACTCGAAAGAAGATATCATCAATTTTAGAACATTTAAACCGTAAATGGGGTAATTCAAGCATAGCAGTTGGAGAATTAATGCTTTTTCCTTATGGTATTCAAAGGGAAAACTTGGTTAATTATCAGAGATGGACCCAGGAATCTACTCTTAGTGCAGCAGATATATATGCAATGATTGGAAGTCCACCCATATTCCGTTTAAGGTATGGTTGGTTCTCCAACACTGAGCTTGGGTTATTAAATATGCAAGTGCCTGTAGCATCCAGCTCCATGCTCAGACAATCCAAAAGTAGTGTGGACAATACTAAAGATCAGATTGTGAATTCAGTTTCATTTCCTATACCATCAACTAATACTTCCATGGAGCTCTATGAAGATTGCAGAACATCCTTGGACAGAAACCATACTCTTATCACTGCTTCAACTGATTTGTCTAATACTAGAGGCAACAGCGTTTACCTGAATACAAGCACTGAGGAATCTCGTGATCCTACAGCCAACACACTCTGGCATGGAAAAGATGTTAGGGATGGAGCTGTGACTACACAGTTGGAAGACATGGATGAGTTGAAATTAAGCAGTGGAACAGGACTGTCAGCTGGAGAGTGGGCTGACAGCCTTACCAACATTAGTGTGGGGGACCTACTTTCAGGAGTGTCCCAGGATCTTGATAATTGCATCAATCCTCCTATTGCTGAGAATTGTCATGATGTTCAACAAATTCCTTTTAGTAGTGATTCTTTTGATGCTGCTATTGCTGCTCACATATCTAGACACCAAGACAAGATGGGGCAATCATCTCTGGCATCCCATATGTCTTCCATCTGGGATGCCGAAGAAACTTGTGATGCCTTTTTATTTAAAAAGGATCCTATTCTTCATGAAGATCGTCCATGTTTATCTCCAGTTGCTTCTTTAGAGCATGAGAAAAAGGTTCCTGAAAGAAGCTTTGACAAATTAGATGAGCTGTCACCTGAAAGAGAGAGGCTTGTGGATGATTGTGCTCAACCAGACCCTATGCCTATGGACAGTTCCGAGTCTGATGCAGATATCCAGGAGCGTTTAGGAAAGAATTTTAGTGTGCTAGCAGATATGTATTGGCCTGATTCCTTGGGACCTTTGGATTTGGATATACCATCATCAACTAAGTACCATAGCGAAGATATAATTTTTAGTGATAGTCTTAGTGGACTGAATCGCTTGATAGCCAGCAGCCTGGATGCATTCCAGAATTGCTCCTTTTTTGGGCTCGACAAGAAGGAAGCACCATCAACAGTTGAGGCTCGAGAATCTGCTGCCCTTTCAGATTTTAAAATAGGAAGTGGTATCTGA 2394 0.4169 MEVEVPISLDSNNLLHPETVVSVQIGDSGVSSSISNAVNPHQPATKKPTRQWAAWTRQEEESFFTALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRRMNKLLGPGLCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFLEALEHQLLKDRKKNVRKRPLQGANCLPSVPTAVSNQSRASGNDARAVKLVLVDSQNILKLGPSKPSTKRNVNMGVNRSNTKGDSNTMKPTRQRKKSGSISTAAYRKWEKAAMAGVSLVADAAEHLERAATVKEIDQDQENPGEKCSDPADYVLPSLPTCPQNQFVDNNVNNSMKLKLQLFPIDEPTRRALEMDKHNPHLELTLSTRKKISSILEHLNRKWGNSSIAVGELMLFPYGIQRENLVNYQRWTQESTLSAADIYAMIGSPPIFRLRYGWFSNTELGLLNMQVPVASSSMLRQSKSSVDNTKDQIVNSVSFPIPSTNTSMELYEDCRTSLDRNHTLITASTDLSNTRGNSVYLNTSTEESRDPTANTLWHGKDVRDGAVTTQLEDMDELKLSSGTGLSAGEWADSLTNISVGDLLSGVSQDLDNCINPPIAENCHDVQQIPFSSDSFDAAIAAHISRHQDKMGQSSLASHMSSIWDAEETCDAFLFKKDPILHEDRPCLSPVASLEHEKKVPERSFDKLDELSPERERLVDDCAQPDPMPMDSSESDADIQERLGKNFSVLADMYWPDSLGPLDLDIPSSTKYHSEDIIFSDSLSGLNRLIASSLDAFQNCSFFGLDKKEAPSTVEARESAALSDFKIGSGI 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02206 797 FunFam TSL-kinase interacting protein 1 16 104 - -
Pumo4g02206 797 PANTHER CRAMPED PROTEIN 37 770 - -
Pumo4g02206 797 FunFam TSL-kinase interacting protein 1 55 116 - -
Pumo4g02206 797 SMART sant 51 99 IPR001005 -
Pumo4g02206 797 ProSiteProfiles Myb-like domain profile. 47 97 IPR001005 -
Pumo4g02206 797 MobiDBLite consensus disorder prediction 210 249 - -
Pumo4g02206 797 ProSiteProfiles SANT domain profile. 55 101 IPR017884 -
Pumo4g02206 797 CDD SANT 54 97 IPR001005 -
Pumo4g02206 797 Pfam Myb-like DNA-binding domain 54 96 IPR001005 -
Pumo4g02206 797 Gene3D - 8 104 - -
Pumo4g02206 797 SUPERFAMILY Homeodomain-like 46 101 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02206 Pumo-Chr4 32457169 32463405 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo4g02206 Myb_DNA-binding 5.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02206 - - gmx:100798411 1470.68