Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02202 ATGGGAACCTGCTTTTCCGCCACCAAAGTCAGCGGCTCCAACGGCAACGCCGTCACCGTCAACAAGAACCGCAAGAAGGGCACCGCCAAGCCGAAATCGGAGACGGTGACGGCGACGGCGAACCCGCAACGGCACAAGGCGAGTTCGCGCCACGTGCCGTGCGGGAAGCGCACCGATTTCGGTTACGAGAAGGATTTCGACAAGCGTTACTCGCTCGGGAAATTGCTCGGACACGGCCAATTCGGCTACACCTACGTCGGAATCGACAAAGCCAATGGCGATCGCGTCGCCGTTAAGAGGCTCGATAAGAGTAAGATGGTTCTGCCTATTGCCGTTGAGGATGTTAAGCGAGAGGTTAAGATATTGAAAGCGCTTGCTGGTCACGAGAATGTGGTTCAGTTCTATAATGCGTTTGAAGATGATTCTTACGTGTACATAGTTATGGAGTTATGCGAGGGTGGAGAACTGCTAGATCGGATATTGGCCAAGAAGGACAGTCGTTATACTGAAAAAGATGCAGCGGTGGTTGTAAGGCAGATGCTCAAGGTTGCAGCTGAGTGTCATTTACATGGTTTGGTACACCGGGACATGAAACCAGAGAATTTTCTTTTTAAATCAACCAAAAAGGATTCACCTTTAAAGGCCACAGATTTTGGTTTGTCAGATTTCATTAAACCTGGGAAGAAGTTTCATGATATTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTGTTAAAACGCAAGTCAGGCCCTCAATCAGATGTGTGGAGTATTGGTGTTATTACATACATATTGCTGTGTGGAAGACGCCCATTTTGGGATAAGACTGAGGATGGTATCTTCAAGGAGGTCTTACGTAAGAAGCCCGATTTCCGTCGGAAACCATGGCCAACTATAAGTAATGCTGCAAAAGATTTTGTGAAAAAATTACTGGTAAAGGATCCTCGGGCGAGATTAACTGCTGCTCTAGCTCTATCACATCCATGGGTTAGAGAAGGAGGAGAAGCATTGGAGATTCCTATTGATATATCTGTCCTGAGCAACATGCGGCAGTTTGTGAAATATAGTCGATTCAAACAATTTGCACTAAGGGTAAGAGAAATTAATTCTAGCCTTTTCATGTCAGAAGGCATGGAACTTGTTTGA 1146 0.4642 MGTCFSATKVSGSNGNAVTVNKNRKKGTAKPKSETVTATANPQRHKASSRHVPCGKRTDFGYEKDFDKRYSLGKLLGHGQFGYTYVGIDKANGDRVAVKRLDKSKMVLPIAVEDVKREVKILKALAGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKKDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPQSDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRKKPDFRRKPWPTISNAAKDFVKKLLVKDPRARLTAALALSHPWVREGGEALEIPIDISVLSNMRQFVKYSRFKQFALRVREINSSLFMSEGMELV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02202 381 Pfam Protein kinase domain 70 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02202 381 MobiDBLite consensus disorder prediction 1 23 - -
Pumo4g02202 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Pumo4g02202 381 FunFam CDPK-related kinase 1 63 155 - -
Pumo4g02202 381 PANTHER SERINE/THREONINE-PROTEIN KINASE 48 368 - -
Pumo4g02202 381 CDD STKc_CAMK 69 329 - -
Pumo4g02202 381 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Pumo4g02202 381 MobiDBLite consensus disorder prediction 1 54 - -
Pumo4g02202 381 ProSiteProfiles Protein kinase domain profile. 70 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02202 381 MobiDBLite consensus disorder prediction 32 46 - -
Pumo4g02202 381 FunFam calcium-dependent protein kinase 28-like 156 349 - -
Pumo4g02202 381 SUPERFAMILY Protein kinase-like (PK-like) 56 363 IPR011009 -
Pumo4g02202 381 Gene3D Transferase(Phosphotransferase) domain 1 62 371 - -
Pumo4g02202 381 SMART serkin_6 70 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02202 Pumo-Chr4 32435206 32439676 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02202 1 364 EF-hand Containing Proteins AT5G66210 77.717 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo4g02202 Pkinase 2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02202 K13412 - gmx:100798941 702.205