Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02195 ATGGCCATCAAAAAATCCAATAAGCTACCCCAAGCAGAAGTCATCAAGCAAATCCTTCAGAAGGGCTACAATGAAGAGGGTCTTCCAGAAGATGTGCCAAAAGGCCACTTTGCAGTCTATGTTGGTGAAAACAGGACAAGATATATTGTCCCAATTTCATGGTTGGCTCATCCACAATTTCAAAGTTTGCTCCAAAGAGCTGAGGAGGAGTTTGGCTTCAATCATGACATGGGCCTTACCATCCCATGTGATGAAGTTGTTTTTGAGTTTCTTACCTCAATGATTAGATGA 291 0.4192 MAIKKSNKLPQAEVIKQILQKGYNEEGLPEDVPKGHFAVYVGENRTRYIVPISWLAHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVVFEFLTSMIR 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02195 96 Pfam Auxin responsive protein 26 95 IPR003676 GO:0009733
Pumo4g02195 96 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 29 93 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02195 Pumo-Chr4 32350877 32351195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02195 29 95 Calmodulin-binding Proteins AT3G43120 50.746 1.07e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02195 K14488 - gmx:100500218 182.956