Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02186 ATGCGTACCCTTCTTATCCTCGTGTTATTGTGCGCACACTTCTTATCATGCGCAAAGTGTGGATTTGTGACGGAGATCCAAGCCTTAACGTCGTTCAAGCTCAACCTCCACGATCCTCTCGGCGCGCTTAACGGCTGGGACCCGTCAACGCCGTTAGCTCCGTGCGACTGGCGCGGCGTTTCGTGCAAAAACGAACGAGTCACCGAGTTGCGAATGCCTCGGCTTCAACTCAGTGGCCAACTCGGTGACCGCATTTCAGACCTACGCATGCTGCGAAGGCTAAGCCTTCGTTCCAACGCCTTCAATGGCACCATTCCCCACTCGCTCTCCAAATGCACGCTCCTACGCGCCTTGTTCCTACAGTACAATTCGCTCTCCGGCGAACTCCCGCCGGAGATCGGAAACCTCGCCGGTCTCCAGATTCTCAACGTCGCCGGCAACAATCTCTCTGGCGAAATCCCCGGCGAACTTCCCCTCCGTCTGAAATACATCGACCTCTCCGCCAATGCCTTTTCCGGCGAGATTCCGAGCACCGTCGCCAGACTCTCCGAGCTTCAGCTCATCAACCTCTCCTATAACAAGTTCTCCGGCCAGATCCCGGCGCGTTTCGGAGAGCTTCAGAATCTGCAATACCTCTGGCTCGATCATAATGTTCTCGGAGGAACCTTACCTTCGTCTCTCGCGAACTGTTCCTCGCTCGTGCATTTGAGTGTCGAAGGGAACGCGCTCGCCGGCGTGTTGCCGGCGGCGATTTCGGCTCTTCCGAAACTCCAGGTGTTGTCCCTCGCGCAGAACAATTTCACAGGCGCCATTCCCGCTTCCGTTTTCTGCAACGTCTCGCTCAAAACGCCGTCGCTTCGCATTGTTCAGTTAGGGTTTAACGGCTTCACGGATTTTGTATGGCCTCAAGCCGCCACGTGTTTCGGCGTTCTTGAGGTTTTGAACATTCAGCGAAATCGCGTGCGCGGCAAGTTTCCGCTGTGGTTAACCAATGTGACCACGTTGTCGGTCCTCGATGTTTCCGGCAACGCGCTTTCCGGCGAGATTGCGCCGGAAATTGGAAGCCTCGGGAGATTGGAGGAGCTGAAGATAGCCAACAATTCATTTTCCGGCGAGATTCCGCCGGAGATCGTGAAATGTAGGTCCCTGCGTGTGGTTGATTTTGAAGGAAACAAGTTTTCCGGCGAGGTTCCTTTGTTTTTCGGTAATCTGACAGGGTTGAAGGTTTTATCTCTCGGCAGGAACCACTTCTCTGGTTCTGTTCCGATGAGTTTTGGTGAGCTTGTTTCTCTTGAAACATTGAGTTTAAGGGGTAATAGATTGAATGGCACAATGCCAGAGGAGGTGATGGGGTTGAAGAATTTGACAATATTGGACCTCAGTGGAAACAAGTTTTCGGGTCATGTTTCTGGGAGAATTGGGAATCTGAGTAGATTAATGGTTCTGAACCTGAGTGGCAATGGCTTCCATGGAGAAATTCCTGCTACTTTAGGAAATCTTTTCCATCTCACCACACTTGACTTGAGTAAACAGAATTTGTCTGGTGAATTACCATTTGAAATTTCAGGACTTCCCAGTTTGCAGGTCATTGCTCTGCAGGAGAACAAGTTGTCTGGATTAATCCCTGAAGGGTTTAGCAGCTTGACCAGCTTGAAATACGTGAACCTAAGTTCTAACGAGTTTTCTGGGCATGTTCCGAAGAACTATGGTTTTCTTCGATCATTGGTTGTTCTTTCACTGTCTGATAACCACATCACAGGAATGATTCCTCCAGAAATTGGAAACTGCTCTGACATTGAAATTCTGGAGCTTGGATCAAATTATTTGGAAGGTGCCATTCCCAGTGATCTCTCTTCCCTTGCCCATTTGAAAGTGCTTGATTTGGGTCAGAACAATTTAACTGAGGCTTTGCCTGATGGTATCTCCAAATGCTCGCGGTTAACTGTTTTGTTAGCAGATCACAACCAACTTTCGGGTGCTATACCAGAGTCACTGGCAGAGTTATCATCCCTTGCAATGCTGGATCTCTCTGCCAACAAATTGAGTGGCGAAATCCCCAGTAATCTAAACACAATCCCTGGTTTAGTGTACTTTAATGTCTCAGGTAACAAGCTAGAAGGTGAGATTCCACCAACGTTGGGATCTAAATTCAACGACCCCTCTGCATTTGCAAACAACCAGAACTTATGTGGGAAGCCATTGGATAGAAAGTGTGAAGATACAGACAGTGGGGAGAGAAATAGGTTAATTGTGTTAATCATTATCATCGCAGTTGGAGCTTGCTTTTTGGCACTATGTTGCTGCTTCTACATCTTCAGCCTTCTGAGATGGCGCAGAAGGATCAAAGCAGCAGTGTCAGGGGAGAAGAAAAAGAGTCCAAGAACAAGTTCAGGAACAAGCCAAAGTCGCAGCAGCACTGACAGCAACGGTCCAAAACTCGTAATGTTCAACACCAAAATCACACTCGCCGAAACAATCGAAGCAACAAGACAATTCGACGAAGAAAACGTGCTGAGCAGAACAAGACACGGCTTAGTATTCAAAGCCTGCTACAACGACGGAATGGTTCTTTCAGTTCGCAAGCTCCAAGACGGGTCACTGGACGAGAACATGTTCAGAAAAGAAGCAGAATCGTTGGGAAAAATCAGGCACCGAAACCTAACAGTTCTAAGAGGCTACTACGCTGGCCCACCAGATGTTCGACTCTTGGTCTACGATTACATGCCCAATGGGAACCTCGCAACGTTGCTCCAAGAAGCTTCTCACTTAGATGGGCACGTTTTGAATTGGCCAATGAGACACCTCATTGCACTAGGAATCGCCCGCGGCTTAGCGTTTCTGCACCAATGCTCACTCATCCACGGTGACATCAAACCCCAGAACGTGCTCTTTGATGCAGACTTCGAAGCCCATTTATCAGATTTCGGGTTAAACAAGTTAGTAGTCACCAACCCAGTTGAAGCCTCCACTTCAAGCACTGCTTTAGTTGGCACATTGGGTTACGTGTCACCGGAGGCAACCCTAACAGGGGAACCTACGAAGGAGTGTGACGTGTACAGCTTCGGCATCGTGTTGCTGGAGCTTCTCACAGGGAAGAGACCAGTGATGTTCACGCAAGATGAGGATATAGTGAAGTGGGTGAAGAAACAGTTGCAGAAGGGGCAAATAACAGAGTTATTAGAGCCTGGTTTGTTTGAACTTGACCCAGAGTCTTCTGAATGGGAAGAGTTTCTGTTGGGTGTGAAAGTGGGTTTGCTTTGCACTGCACCAGACCCTCTTGATCGACCAACAATGTCTGACATTGTGTTCATGCTCGAAGGTTGTCGTGTTGGACCCGATATTGCGTCCTCTGCTGATCCCACCACGCAACCTTCTCCAGTGTAA 3384 0.4897 MRTLLILVLLCAHFLSCAKCGFVTEIQALTSFKLNLHDPLGALNGWDPSTPLAPCDWRGVSCKNERVTELRMPRLQLSGQLGDRISDLRMLRRLSLRSNAFNGTIPHSLSKCTLLRALFLQYNSLSGELPPEIGNLAGLQILNVAGNNLSGEIPGELPLRLKYIDLSANAFSGEIPSTVARLSELQLINLSYNKFSGQIPARFGELQNLQYLWLDHNVLGGTLPSSLANCSSLVHLSVEGNALAGVLPAAISALPKLQVLSLAQNNFTGAIPASVFCNVSLKTPSLRIVQLGFNGFTDFVWPQAATCFGVLEVLNIQRNRVRGKFPLWLTNVTTLSVLDVSGNALSGEIAPEIGSLGRLEELKIANNSFSGEIPPEIVKCRSLRVVDFEGNKFSGEVPLFFGNLTGLKVLSLGRNHFSGSVPMSFGELVSLETLSLRGNRLNGTMPEEVMGLKNLTILDLSGNKFSGHVSGRIGNLSRLMVLNLSGNGFHGEIPATLGNLFHLTTLDLSKQNLSGELPFEISGLPSLQVIALQENKLSGLIPEGFSSLTSLKYVNLSSNEFSGHVPKNYGFLRSLVVLSLSDNHITGMIPPEIGNCSDIEILELGSNYLEGAIPSDLSSLAHLKVLDLGQNNLTEALPDGISKCSRLTVLLADHNQLSGAIPESLAELSSLAMLDLSANKLSGEIPSNLNTIPGLVYFNVSGNKLEGEIPPTLGSKFNDPSAFANNQNLCGKPLDRKCEDTDSGERNRLIVLIIIIAVGACFLALCCCFYIFSLLRWRRRIKAAVSGEKKKSPRTSSGTSQSRSSTDSNGPKLVMFNTKITLAETIEATRQFDEENVLSRTRHGLVFKACYNDGMVLSVRKLQDGSLDENMFRKEAESLGKIRHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHLDGHVLNWPMRHLIALGIARGLAFLHQCSLIHGDIKPQNVLFDADFEAHLSDFGLNKLVVTNPVEASTSSTALVGTLGYVSPEATLTGEPTKECDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLFELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIASSADPTTQPSPV 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02186 1127 PANTHER OS05G0588300 PROTEIN 305 424 - -
Pumo4g02186 1127 Gene3D Phosphorylase Kinase; domain 1 794 907 - -
Pumo4g02186 1127 SMART LRR_sd22_2 452 478 - -
Pumo4g02186 1127 SMART LRR_sd22_2 428 451 - -
Pumo4g02186 1127 SMART LRR_sd22_2 620 643 - -
Pumo4g02186 1127 SMART LRR_sd22_2 668 691 - -
Pumo4g02186 1127 SMART LRR_sd22_2 254 281 - -
Pumo4g02186 1127 SMART LRR_sd22_2 206 229 - -
Pumo4g02186 1127 SMART serkin_6 832 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02186 1127 SMART LRR_typ_2 428 452 IPR003591 -
Pumo4g02186 1127 SMART LRR_typ_2 356 380 IPR003591 -
Pumo4g02186 1127 SMART LRR_typ_2 476 500 IPR003591 -
Pumo4g02186 1127 SMART LRR_typ_2 88 112 IPR003591 -
Pumo4g02186 1127 SMART LRR_typ_2 524 547 IPR003591 -
Pumo4g02186 1127 SMART LRR_typ_2 572 596 IPR003591 -
Pumo4g02186 1127 SMART LRR_typ_2 668 692 IPR003591 -
Pumo4g02186 1127 SMART LRR_typ_2 404 427 IPR003591 -
Pumo4g02186 1127 SMART LRR_typ_2 136 160 IPR003591 -
Pumo4g02186 1127 SMART LRR_typ_2 254 278 IPR003591 -
Pumo4g02186 1127 SMART LRR_typ_2 620 644 IPR003591 -
Pumo4g02186 1127 SMART LRR_typ_2 206 230 IPR003591 -
Pumo4g02186 1127 SMART LRR_typ_2 182 205 IPR003591 -
Pumo4g02186 1127 ProSitePatterns Serine/Threonine protein kinases active-site signature. 952 964 IPR008271 GO:0004672|GO:0006468
Pumo4g02186 1127 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 908 1113 - -
Pumo4g02186 1127 Pfam Leucine rich repeat 502 560 IPR001611 GO:0005515
Pumo4g02186 1127 Pfam Leucine rich repeat 160 219 IPR001611 GO:0005515
Pumo4g02186 1127 Pfam Leucine rich repeat 382 441 IPR001611 GO:0005515
Pumo4g02186 1127 Pfam Leucine rich repeat 600 657 IPR001611 GO:0005515
Pumo4g02186 1127 FunFam Putative LRR receptor-like serine/threonine-protein kinase 23 158 - -
Pumo4g02186 1127 FunFam Inactive leucine-rich repeat receptor-like protein kinase 159 249 - -
Pumo4g02186 1127 ProSiteProfiles Protein kinase domain profile. 832 1114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02186 1127 MobiDBLite consensus disorder prediction 786 812 - -
Pumo4g02186 1127 Gene3D Ribonuclease Inhibitor 280 470 IPR032675 -
Pumo4g02186 1127 FunFam Uncharacterized protein 254 470 - -
Pumo4g02186 1127 Gene3D Ribonuclease Inhibitor 471 746 IPR032675 -
Pumo4g02186 1127 MobiDBLite consensus disorder prediction 790 812 - -
Pumo4g02186 1127 SUPERFAMILY L domain-like 493 731 - -
Pumo4g02186 1127 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Pumo4g02186 1127 Pfam Protein kinase domain 843 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02186 1127 SUPERFAMILY Protein kinase-like (PK-like) 811 1112 IPR011009 -
Pumo4g02186 1127 SUPERFAMILY L domain-like 333 575 - -
Pumo4g02186 1127 Gene3D Ribonuclease Inhibitor 160 279 IPR032675 -
Pumo4g02186 1127 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 617 738 - -
Pumo4g02186 1127 FunFam Putative LRR receptor-like serine/threonine-protein kinase 795 907 - -
Pumo4g02186 1127 FunFam Piriformospora indica-insensitive protein 2 471 565 - -
Pumo4g02186 1127 Gene3D Ribonuclease Inhibitor 22 159 IPR032675 -
Pumo4g02186 1127 Gene3D Transferase(Phosphotransferase) domain 1 908 1116 - -
Pumo4g02186 1127 SUPERFAMILY L domain-like 46 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02186 Pumo-Chr4 32163152 32167438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02186 4 1127 Receptor kinase-like Gene Family AT4G36180 66.637 0.0 1458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Pumo4g02186 Pkinase 1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02186 - - gmx:100804785 2000.33