Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02177 ATGGATTTGTTCTTAGAATTGAAAACCGCACTGGAACCGTTCCGTGAGACGCTCTTGTTCACAGTCCCCGTGGCGTTGCTGCTGCTGCTGGGTTTAGTGTCCCGAATTCGGAGAAAAACGGCGCCGTATCCACCAGGCCCAAAGGGCCTACCCGTAATAGGCAACATGGACATCATGGACCAGCTCACGCACCGAGGCTTGGCGAATTTAGCGAAGCAATACGGCGGCGTTTTGCACCTCCGCATGGGGTTCCTCCACATGGTGGCGATTTCAAACGCGGAAGCGGCGCGTGAAGTGCTCCAAGTCCAAGACAACATCTTCTCCAACCGCCCCGCCACCATCGCCATCAGCTACCTAACCTACGACCGCGCCGACATGGCTTTCGCGCACTACGGCCCCTTCTGGCGCCAGATGCGCAAGATCTGCGTCATGAAGCTCTTCAGCCGCAAGCGCGCCGAGTCCTGGAACTCCGTCAGAGACGAAGTCGACACCATAATCCGTTCCGTTAATGCCAACCTCGGAAACGCCGTTAACGTTGGAGAACTCGTCTTCAACCTCACCAAAAACATCATCTACCGCGCGGCTTTCGGGTCCAGCTCCCAGGAGGGGCAGGACGAGTTCATTTCGATTCTTCAGGAGTTTTCGAAGCTCTTCGGCGCGTTCAATATTGCGGACTTTGTCCCCTGCCTCGGGTGGGTTGATCCTCAGGGACTCAATAAGAGGCTCGTGGAGGCACGTGCCGCGTTGGATGGCTTCATCGACCATATCATCGACGAGCACGTGCAGAAGAAGAAGAAGAAGAGTGACCAGAACAACTGTGAGGAAGAAAGTGACATGGTTGATGAGTTGCTCAATTTTTATAGCGAGGAAGCCAAACTGAATAATGAATCCGACGACTTGCACAACTCCATCAGACTCACCAAGGACAACATCAAAGCCATCATCATGGACGTCATGTTCGGAGGGACCGAAACGGTTGCGTCGGGAATCGAGTGGGCGATGGCGGAGCTGATGAGAAGCCCAGACGACCTGCGGCGCGTGCAGCAAGAACTCGCTGACGTGGCAGGCCTGGAGCGGCGCGTGGAGGAATCGGACCTCGAAAAGCTCGTCTATCTAAAATGCGCGGTGAAGGAGACGCTGCGGCTGCACCCGCCGATTCCGCTCCTCCTCCACGAGACGGCGGAGGACGCGGCGGTGTGCGGCTACCACGTGCCGAAGGGGTCGCGCGTGATGATAAACGCGTGGGCCATAGGGAGGGACAAGGACTCGTGGGAGGACGCGGAAGCGTTCAAGCCTTCGCGGTTTCTGAACCCGCACGTGCCGGATTTTAAAGGGAGCAACTTCGAGTTCATTCCATTCGGGTCGGGTCGGAGGTCCTGCCCCGGAATGCAACTGGGTCTTTACACGCTGGAACTGGCCGTGGCCCACTTGCTTCACTGCTTCACGTGGGAGTTACCGAATGGAATGAAACCCAGCGAGTTGGACACGAGTGACGTGTTCGGACTCACTGCGCCTAGGGCGAGTCGACTCGTAGCGGTTCCCTCTAAGCGCGTGTTATGCCCTTTCTAA 1569 0.5692 MDLFLELKTALEPFRETLLFTVPVALLLLLGLVSRIRRKTAPYPPGPKGLPVIGNMDIMDQLTHRGLANLAKQYGGVLHLRMGFLHMVAISNAEAAREVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKICVMKLFSRKRAESWNSVRDEVDTIIRSVNANLGNAVNVGELVFNLTKNIIYRAAFGSSSQEGQDEFISILQEFSKLFGAFNIADFVPCLGWVDPQGLNKRLVEARAALDGFIDHIIDEHVQKKKKKSDQNNCEEESDMVDELLNFYSEEAKLNNESDDLHNSIRLTKDNIKAIIMDVMFGGTETVASGIEWAMAELMRSPDDLRRVQQELADVAGLERRVEESDLEKLVYLKCAVKETLRLHPPIPLLLHETAEDAAVCGYHVPKGSRVMINAWAIGRDKDSWEDAEAFKPSRFLNPHVPDFKGSNFEFIPFGSGRRSCPGMQLGLYTLELAVAHLLHCFTWELPNGMKPSELDTSDVFGLTAPRASRLVAVPSKRVLCPF 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02177 522 Gene3D Cytochrome P450 36 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 Coils Coil 347 367 - -
Pumo4g02177 522 Pfam Cytochrome P450 44 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 PANTHER CYTOCHROME P450 84A1-RELATED 13 522 - -
Pumo4g02177 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Pumo4g02177 522 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02177 522 CDD CYP71-like 73 510 - -
Pumo4g02177 522 FunFam Cytochrome P450 84A1 36 516 - -
Pumo4g02177 522 SUPERFAMILY Cytochrome P450 44 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02177 Pumo-Chr4 31958136 31964180 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02177 51 520 Monolignol Biosynthesis Gene Families AT4G36220 75.159 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02177 K09755 - gmx:100807448 922.924