Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02176 ATGGATTTGCTCCTAGAATTGAAAACCGCACTGGAACCGTTCCGCGAGACGCTCTTGTTCACAATCCCCGTGGCCTTGCTGCTGCTGGGTTTAGTGACCCGAATTCGGACAAAAACGGTGCCGTATCCACCTGGACCAAAAGGCCTTCCCATAATAGGCAACGTGAACCTGATAGACCATCTCACACACAAGGGTTTGGCGAAATTAGCGAAGCAATACGGCGGCGTTTTGCACCTCCGCATGGGGCTCCTCCACATGGTGGCGATTTCAAGCGTGGAAGCGGCGCGTGAAGTGCTCCAAGTCCAAGACAACATCTTCTCCAACCGCCCCGCCACCATCGCCATCAGGTACCTAACCTACGACCGCGCCGACATGGCTTTCGCGCACTACGGCCCCTTCTGGCGCCACATGCGCAAAGTCTGCGTCATGAAACTCTTCAGCCGCAAGCGCGCCGAGTCGTGGAACTCCGTCAGAGACGAAGTCGACGCCGTCGTCCGCGCCGTTAATGCGAACCTCGGCAACGCCGTTAACGTCGGGGAGCTCGTGTTTTACCTCACGAAGAACATCGTGTACCGCGCGGCGTTCGGGTCTGGTTCCCGGGAGCGACAAGACGAGTTCATTTCGATCCTTCAGGAGTTTTCGAAGCTGTTTGAGGCCTTCAATGTTGCGGATTTTCTTCCCTTTCTCGGGTGGATTGATCCTCAGGGTCTCAACAAGAGGCTCGTCAAGGCACGTGCCGCGTTGGATGGTTTCATCGACAAGATCATTGAGGAGCACGTGCAGAAGAAGAGGAGTGGCGACGTCTGTGACGAGGAAAGTGACATGGTTGATGAGTTGCTGAGTTTTTACAGCGAAGAGGCTAAACTGAAGAATCATGAATCGGACGGCCAGCAGAACTCCATCAGACTCACCAAGGACAACATCAAAGCCGTCGTCATGGACGTGATGTTCGGAGGGACCGAAACGGTGGCGTCGGGAATCGAGTGGGCAATGGCGGAGCTAATGCGAAGCCCAGAAGATCTCCGGCGCGTGCAGCAAGAACTCGCCGACGTGATAGGCCTGGACCGGCGCGTGGACGAATCAGACATCGAAAAACTCACATATCTAAAATGCGCGGTGAAGGAGACGCTGCGGCTGCACCCGCCGATTCCGCTCCTCCTCCACGAGACGGCGGAGGACGCGGCGGTGTGCGGCTACTTCGTGCCGAAGGGGTCGCGCGTGATGATAAACGTGTGGGCGATCGGGAGGGACAAAGACACGTGGGCGGACCCGGAAGAGTTCAAGCCTTCGCGGTTTCTGAACCCGCACGTGCCGGATTTTAAAGGGAGTAATTTTGAGTTTATTCCATTCGGATCGGGTCGGAGATCCTGCCCCGGAATGCAACTGGGTCTTTACGCGCTGGAACTGGCGGTGGCGCACTTGCTTCACTGCTTCACGTGGGAGTTACCCGATGGGATGAAACCCAGCGAGTTGGACACGAGTGACGTGTTCGGACTCGCCGCTCCCAGGGCGAGTCGACTCGTCGCGGTTCCATCTAAGCGCGTGGTGTGTCCTCTCTGA 1560 0.5699 MDLLLELKTALEPFRETLLFTIPVALLLLGLVTRIRTKTVPYPPGPKGLPIIGNVNLIDHLTHKGLAKLAKQYGGVLHLRMGLLHMVAISSVEAAREVLQVQDNIFSNRPATIAIRYLTYDRADMAFAHYGPFWRHMRKVCVMKLFSRKRAESWNSVRDEVDAVVRAVNANLGNAVNVGELVFYLTKNIVYRAAFGSGSRERQDEFISILQEFSKLFEAFNVADFLPFLGWIDPQGLNKRLVKARAALDGFIDKIIEEHVQKKRSGDVCDEESDMVDELLSFYSEEAKLKNHESDGQQNSIRLTKDNIKAVVMDVMFGGTETVASGIEWAMAELMRSPEDLRRVQQELADVIGLDRRVDESDIEKLTYLKCAVKETLRLHPPIPLLLHETAEDAAVCGYFVPKGSRVMINVWAIGRDKDTWADPEEFKPSRFLNPHVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALELAVAHLLHCFTWELPDGMKPSELDTSDVFGLAAPRASRLVAVPSKRVVCPL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02176 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Pumo4g02176 519 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02176 519 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02176 519 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02176 519 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02176 519 PANTHER CYTOCHROME P450 84A1-RELATED 13 519 - -
Pumo4g02176 519 Gene3D Cytochrome P450 35 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02176 519 SUPERFAMILY Cytochrome P450 43 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02176 519 FunFam Cytochrome P450 84A1 35 513 - -
Pumo4g02176 519 CDD CYP71-like 72 507 - -
Pumo4g02176 519 Pfam Cytochrome P450 43 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02176 519 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02176 519 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02176 519 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02176 519 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02176 519 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02176 519 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02176 519 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02176 519 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02176 Pumo-Chr4 31886519 31891902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02176 50 519 Monolignol Biosynthesis Gene Families AT4G36220 73.418 0.0 744